Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_001604.1 Length=39937 Score E Sequences producing significant alignments: (Bits) Value seq17604 224 3e-54 >seq17604 Length=764 Score = 224 bits (248), Expect = 3e-54 Identities = 126/127 (99%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 24106 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 24165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 176 Query 24166 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACT 24225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACT 116 Query 24226 ATATGCG 24232 |||| || Sbjct 115 ATATCCG 109 Score = 113 bits (124), Expect = 1e-20 Identities = 84/98 (86%), Gaps = 8/98 (8%) Strand=Plus/Minus Query 22881 CGAAATTAATACGACTCACTATAGGGA------GACC--ACAACGGTTTCCCTCTAGAAA 22932 |||||||||||||||||||||||||| || | | ||| || ||||||||||| Sbjct 761 CGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAA 702 Query 22933 TAATTTTGTTTAACTTTAAGAAGGAGATATACATATGG 22970 |||||||||||||||||||||||||||||||||||||| Sbjct 701 TAATTTTGTTTAACTTTAAGAAGGAGATATACATATGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127640468209994