Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq11176 109 4e-19 >seq11176 Length=1573 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 ||||| || || || | ||| |||| ||| || || ||||| || ||||| || || ||| Sbjct 726 TATCCACCACGAAGGCGAAGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCG 667 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 | || ||| || || |||| || ||||||||| |||| |||| || ||||| Sbjct 666 GACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGT 607 Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTC 18274 || | ||||||||| || ||| | |||||| ||| | | | | ||| ||| | ||| Sbjct 606 GGAATGCCTTCCTTGTCTTGAATCT-TTGCTTTGACATTTTCGATAGTATCAGAAGCCTC 548 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| |||| || ||||| || ||||||||||| |||||| Sbjct 547 CACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379233212940435