Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq22945 145 3e-30 >seq22945 Length=528 Score = 145 bits (160), Expect = 3e-30 Identities = 285/414 (69%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 43584 TCCTTGAAGGCTTCCAGCATCAGCCACACGCCGCGCAACGTCAGCCGATTGAGGGCCTGA 43643 |||||| | |||||||||| |||||| | ||| |||| ||||| |||||||| |||||| Sbjct 29 TCCTTGTACGCTTCCAGCAGCAGCCAGATGCCTCGCAGCGTCAAGCGATTGAGCGCCTGA 88 Query 43644 TACTTGGCGGTCGCGCTCGACTGCTCGGACAGCAAGCCGGAGAAACCTTTGCATGGAGCG 43703 |||||| ||||| ||| ||| | |||| |||| ||| || || || || || Sbjct 89 TACTTGTCGGTCTTGCTTTTGCCCTCCGCGAGCAGGCCGCTGAAGCCCTTACAGGGGGCC 148 Query 43704 GACAAGAACACGATATCGGGGAACTCGCCATGCGCTG-CGCGCCGAATGTCGTCCGGTAC 43762 || | || ||||| | || |||| ||| | |||| | ||||| |||| | Sbjct 149 GAGAGAAAAACGATGTGCGGCCGCTCGTGATGGAAGGCCGCG-TGTATGTCCGCCGGCAT 207 Query 43763 CGCCTGCTGCCAATCGGGATCAGGGT-CGCGACTGTGAAAGGCCCGGTACTGCTCCAGGT 43821 || | ||||| |||| || | | || | || || || ||| || || ||| Sbjct 208 GGCTTCGTGCCAGTCGGCGGGGGGCTGCACG-CCATGGAATGCGATGTATTGATCGCGGT 266 Query 43822 CGAACAGATCGAGCAGGGTGCCGGGAACGCCGGCAAGGCGCGTGAAATCACGGATGGCCG 43881 |||||| || |||| |||||||| ||||| || ||||||||| || || ||||||| Sbjct 267 CGAACATGTCCAGCACGGTGCCGGCCACGCCCGCGGCGCGCGTGAAGTCTCGAATGGCCG 326 Query 43882 CCGGATCGTTGTCGATGCCCCCGATGCAGCGGAACTTGGCATTCAGACTACCGACACGAG 43941 | |||||||||| ||| || | ||| ||||| | | | |||| || | Sbjct 327 CTACGTCGTTGTCGACGCCGCCCACGCAACGGAAACGCCCGCGCTGCATACC--CAGCAT 384 Query 43942 CCGAT--CCCTTGTTGAAGCCTTTGGCGCCGGCACCGAGCCCGCAAAACAGATG 43993 | | | || ||||||||| ||||||||| | ||||||||||| |||||||| Sbjct 385 CGGCTTCGCCGCGTTGAAGCCCTTGGCGCCGCCGCCGAGCCCGCAGAACAGATG 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183557351937468