Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_004777.1 Length=37555 Score E Sequences producing significant alignments: (Bits) Value seq17604 210 5e-50 >seq17604 Length=764 Score = 210 bits (232), Expect = 5e-50 Identities = 125/130 (96%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 21723 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 21782 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 176 Query 21783 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTTAAAGGAGGAGGA 21842 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 175 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA---AGGAGGA 119 Query 21843 ACTATATGCG 21852 ||||||| || Sbjct 118 ACTATATCCG 109 Score = 87.8 bits (96), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 13/102 (13%) Strand=Plus/Minus Query 20497 GAAATTAATACGACTCACTATAGG--------GAGACCACAACGGTTTCCCTCTAGAAAT 20548 |||||||||||||||||||||||| ||| | ||| || |||||||||||| Sbjct 760 GAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAAT 701 Query 20549 AATTCTTTGTTTAACTTTCTTAAGAAGGAGACATACATATGG 20590 ||| ||||||||||| |||||||||||| |||||||||| Sbjct 700 AAT--TTTGTTTAACT---TTAAGAAGGAGATATACATATGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120020237244902