Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq17973 87.8 7e-13 >seq17973 Length=741 Score = 87.8 bits (96), Expect = 7e-13 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 10140 ATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGT 10199 |||||| || ||||| || || | || || ||| | || |||||| ||| |||| Sbjct 249 ATGGCATCGGTCAACAAAGTCATCCTCGTCGGCAACCTCGGCCGCGATCCCGAAACCCGT 190 Query 10200 TACCTGCCGAGCGGCGACGCGGT-TGCGAACATCCGTCTCGCGACGACCGATCGATACAA 10258 | | |||||||||||| ||| ||| ||| |||||||| ||||| | || Sbjct 189 ACCTTCCCGAGCGGCGACCAGGTCTGC-AACGCGACCCTCGCGACCACCGACAAGTGGAA 131 Query 10259 GGACAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGG 10318 ||||||| |||||||| || || || || || |||||||| || |||| ||| Sbjct 130 GGACAAGCAAAGCGGCGAGATGCGCGAAGCCACCGAGTGGCACCGTCTCGTGTTCAACGG 71 Query 10319 TCGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGC 10358 || ||||| || |||| || || |||||||||||||| Sbjct 70 CCGCCTGGCCGAAATCGCCGCGCAGTACCTGCGCAAGGGC 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204237935077449