Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq11176 105 6e-18 >seq11176 Length=1573 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||| || ||||| | |||| || |||||||||||||||| || | | Sbjct 687 TCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 628 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTT-GATAGA 48654 || | ||||||||||| || | | ||||||||| ||| || ||||| || | Sbjct 627 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTT-TGCTTTGACATT 569 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | || ||||| | || |||| |||| ||||||||||||||| || | ||| || || Sbjct 568 TTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTAC 509 Query 48715 AAAAATCTGCAT 48726 |||||||||||| Sbjct 508 AAAAATCTGCAT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421128173981963