Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq4171 951 0.0 >seq4171 Length=4273 Score = 951 bits (1054), Expect = 0.0 Identities = 559/588 (95%), Gaps = 0/588 (0%) Strand=Plus/Minus Query 175063 GAGCTCTGCTTATATAGACCTCCCATAGTAAACGCCTACCGCCCATTTGCGTCAATGGGG 175122 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 4102 GAGCTCTGCTTATATAGACCTCCCACCGTACACGCCTACCGCCCATTTGCGTCAATGGGG 4043 Query 175123 CGGAGTTATTACGACATTTTGGAAAGTCCCGTTGAATTTGGTGCCAAAACAAACTNNNNN 175182 ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4042 CGGAGTTGTTACGACATTTTGGAAAGTCCCGTTGATTTTGGTGCCAAAACAAACTCCCAT 3983 Query 175183 NNNNNNNNNNNNNNNNNNGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 175242 |||||||||||||||||||||||||||||||||||||||||| Sbjct 3982 TGACGTCAATGGGGTGGAGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 3923 Query 175243 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 175302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3922 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 3863 Query 175303 GCCAAGTAGGAAAGTCCCGTAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 175362 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3862 GCCAAGTAGGAAAGTCCCATAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 3803 Query 175363 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 175422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3802 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 3743 Query 175423 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 175482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3742 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 3683 Query 175483 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 175542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3682 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 3623 Query 175543 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 175602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3622 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 3563 Query 175603 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 175650 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3562 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 3515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753713366936880