Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq16248 131 5e-26 >seq16248 Length=867 Score = 131 bits (144), Expect = 5e-26 Identities = 223/314 (71%), Gaps = 12/314 (4%) Strand=Plus/Minus Query 35584 CAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTGTGCG-CGGTGATCCTGCCGCGCT 35642 || ||||||||||||||| || | ||||||| || |||| | ||||||||||||||| Sbjct 624 CACCGGCATCGCGATCCACCTCGGCGACCCGGC-CTATGCGGCCATGATCCTGCCGCGCT 566 Query 35643 CGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--GGTACCGGCCTCATCGATGC 35700 |||| || ||||| ||||||||||| || |||||| ||| ||| |||||||| Sbjct 565 CGGGACTGGGCCACAAGCACGGCATCGTGCTGGGCAACCTGGT--CGGGCTCATCGACAG 508 Query 35701 GGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGGCCGCGAGGCCTTCACCAT 35760 ||||||||||| | | ||||||| ||||||| ||| || | | |||| | Sbjct 507 CGATTACCAGGGCGAGCTCAAGATCAGCGCCTGGAACCGCAGCGACACGCGCTTCGTGCT 448 Query 35761 CGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGTCGTGC--GCGTAGGCTTG 35818 ||||| || ||| | ||||| ||||| ||| ||||||| |||| ||| || || Sbjct 447 GCAGCCGATGGAGCGGCTCGCGCAACTGGTCATCGTGCCGGTGGTGCAGGCGAAG--TTC 390 Query 35819 CGAGTGGTGGACACTTTCGTCGACAGCGC-GCGCGGCGCGGGTGGATTCGGTCACACCGG 35877 | || || | |||| || | ||| |||||||| ||| || | ||| |||||| Sbjct 389 CATGTCGTCACCGAATTCG-CGCCCACGCAGCGCGGCGAGGGCGGCTACGGCTCCACCGG 331 Query 35878 CGTGCGCTGACTGG 35891 | || ||||| || Sbjct 330 CAAGCACTGACCGG 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149093561766630