Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq5 131 4e-26 >seq5 Length=40538 Score = 131 bits (144), Expect = 4e-26 Identities = 220/316 (70%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 6488 AAATCAACCACAGTGCAGGTCACCGATTCCGTTGGCATGCTGGAAACCTATGCTGAAGTC 6547 ||||| ||||| | ||||| || || || ||| ||||| | || |||||||| Sbjct 40456 AAATCCACCACCGCACAGGTTGATGAAGCCTGCGGTATGTTGGAAGCGTACTCTGAAGTC 40397 Query 6548 GATAAGTCACTGGCTGATTTGAACGGCAATACCGCCGAATTCCGCCTGTCTGAAGACCGC 6607 |||||| ||||| || ||||||| |||||||| |||||||| |||| |||||| || Sbjct 40396 GATAAGGATCTGGCCGAACTGAACGGTAATACCGCGCAATTCCGCTTGTCCGAAGACAGC 40337 Query 6608 GCATTTATTGAAGCGATGAATCAGCAGATGGCGCAGACGCTGTTTTATGGTGATTCCAGC 6667 ||||| | ||||| |||||||| |||||| || |||||||| ||| | || || Sbjct 40336 GCATTCCTGGAAGCCATGAATCAAACGATGGCATCCACTCTGTTTTACGGT-AACCCGGC 40278 Query 6668 -GTTAACCCTCAGCAGTTTATGGGACTGTCCTCCCGCTATTCCAGTCTGTCTGCGGGTAA 6726 ||||| |||| || | || ||| | | || |||||||| ||| ||||| Sbjct 40277 AAACGACCCTAAGCAATTCTTAGGTCTGGCAACACGTTATTCCAGCACCAGTGCAGGTAA 40218 Query 6727 TGCTCAGAACATCATTGATGCTGGTGGCACGGGTACAGATAACACCTCAATCTGGTTAGT 6786 | ||||| || | | | ||||||| | ||| | | ||||| || |||| | || Sbjct 40217 CGGCCAGAATATTCTGAAAGGTGGTGGCTCCGGTTCTGTGAACACATCCATCTATCTGGT 40158 Query 6787 GGTGTGGGGCGAAAAC 6802 || ||||| |||||| Sbjct 40157 TGTCTGGGGTGAAAAC 40142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124975626734796