Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq11176 116 3e-21 seq4840 84.2 2e-11 >seq11176 Length=1573 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||| ||||| ||||| || |||||| || ||||| |||||| ||||||||||| Sbjct 693 GTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCC 634 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT- 131156 || |||| | |||||||| || || || || ||||| ||||| ||| | | ||||| Sbjct 633 GCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCT-TGAATCTTTGCTTT 575 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | |||||| | | ||| | |||| || | ||||||||| || | ||| Sbjct 574 GACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGT 515 Query 131217 TTTTACGAAAATCTGCAT 131234 ||||| ||||||||||| Sbjct 514 CTTTACAAAAATCTGCAT 497 >seq4840 Length=3826 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 131095 CCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC 131154 ||||| | || || |||||||| || ||||| || ||||||||||| |||||| Sbjct 2414 CCTGCAAAAATCAACCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGTATTTTCGCT 2473 Query 131155 TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGA 131214 || | | ||| | ||||| | ||| |||| || | |||| |||||||| |||| | Sbjct 2474 TTTACATTCTCAATTGTATCTGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTAAA 2533 Query 131215 GTTTTTACGAAAATCTGCATG 131235 ||||| || ||||| |||||| Sbjct 2534 GTTTTGACAAAAATTTGCATG 2554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471871414465920