Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq11176 91.5 1e-13 >seq11176 Length=1573 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || ||||| || ||||| ||||||||||| || ||||| | |||| || Sbjct 714 AGGCGAAGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGA 655 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| |||||||| ||||| ||||| ||||||||||| || | || || Sbjct 654 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCC 595 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACT---CACACTATCAGTAGATTCGCATTCGACC 34086 |||| | | | | ||||||| || | | | | |||||| || || ||||| Sbjct 594 TTGT-CTTGAATCTTTGCTT--TGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGT 538 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||||| || || | || || ||||| || |||||| Sbjct 537 GTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGCATT 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396946438298326