Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_009819.1 Length=40539 Score E Sequences producing significant alignments: (Bits) Value seq12215 82.4 2e-11 >seq12215 Length=1377 Score = 82.4 bits (90), Expect = 2e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 12768 GTTGTTATTGATGAGCTGTCAAGCTTTAAGTCTAGTAAGTCAAAACGGTTTAGGGCTTTG 12827 ||||| || |||||||| ||||| ||||| || | || | ||||| |||| || || Sbjct 1051 GTTGTGATAGATGAGCTTTCAAGTTTTAAATCGTATCAGGCGAAACGTTTTAAAGCATTA 992 Query 12828 CGAAAAGTTAGACCGAAAGTCCAACGCCTTGTAGGACTAACAGGAACCCCAGCGCCTAAC 12887 | || | ||| |||||||| || | ||||||| || |||||||| || | ||||| Sbjct 991 CTGAAGGCTAGGCCGAAAGTTAAAAGGGTTGTAGGTCTTACAGGAACTCCTTCTTCTAAC 932 Query 12888 AGTTTGATTGATTTGTGGCCGCAGATTTATCTGATGGACAGAGGCGACAGGCTTGAGACT 12947 | | || ||||||||| | || || ||| | || | || || ||||| | | | Sbjct 931 GGGCTTATGGATTTGTGGGCTGAGTTTAGGCTGCTTGATATGGGTGAAAGGCTAG-GCC- 874 Query 12948 AGCCAGACT-CGATTTAAAGACA--AGTATTTTGTTCCTGATAAGCGTAA 12994 || | | | || ||| | || | | ||||| ||||||||||||||| Sbjct 873 -GCTATATTACGTATTATCGGCAGAACTTTTTTGATCCTGATAAGCGTAA 825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129566320032406