Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_011045.1 Length=38841 Score E Sequences producing significant alignments: (Bits) Value seq17604 212 2e-50 >seq17604 Length=764 Score = 212 bits (234), Expect = 2e-50 Identities = 124/127 (98%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 22573 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 22632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 176 Query 22633 GCAT-ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTTAAAGGAGGAACT 22691 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 175 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACT 116 Query 22692 ATATGCG 22698 |||| || Sbjct 115 ATATCCG 109 Score = 84.2 bits (92), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 13/102 (13%) Strand=Plus/Minus Query 21347 GAAATTAATACGACTCACTATAGG--------GAGACCACAACGGTTTCCCTCTAGAAAT 21398 |||||||||||||||||||||||| ||| | ||| || |||||||||||| Sbjct 760 GAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAAT 701 Query 21399 CATTCTTTGTTTAACTTTCTTAAGAAGGAGACATACATATGG 21440 || ||||||||||| |||||||||||| |||||||||| Sbjct 700 AAT--TTTGTTTAACT---TTAAGAAGGAGATATACATATGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124134266221018