Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19325 105 8e-18 seq2469 95.1 2e-14 >seq19325 Length=667 Score = 105 bits (116), Expect = 8e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || | ||| || || ||||| || || |||||||| || |||||||| ||| Sbjct 148 TTCTTGTCCAAACCATAAGCAATAGCAGCTGCTGTTGGTTCGTTGATAATACGTAGAACA 89 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || |||||||| | | | |||||| || ||||||||||| ||||| |||||||| Sbjct 88 TTTAGACCAGCAATTGCACCGGAATCTTTAGTGGCTTGTCGTTGTGAATCATTAAAGTAT 29 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742 || ||||| || | || || ||| ||| Sbjct 28 GCGGGGACTGTAATAACAGCATCCTTGA 1 >seq2469 Length=6275 Score = 95.1 bits (104), Expect = 2e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 184231 TTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAAT 184290 |||||| | ||| || || |||||||| | |||||| |||||||| ||||| | || Sbjct 1716 TTTACCACGAAGAGGGAACACACCGTACTTATCACGTCCAACAACACCGAGACCTGAAAC 1657 Query 184291 TGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGT 184350 || | | ||| || ||||||||||| |||| |||||| ||||||| | || | | | Sbjct 1656 AGCCAACGATTTGGCTGAATCACCTTCCGTAAGAATAAGCGTACACTGTGCCGAATTTTT 1597 Query 184351 GGTACCGGCTTTATTGGCATCGTCGAGTTTTGGAATACCC 184390 ||||| || | || || || || |||||||| | |||| Sbjct 1596 CGTACCAGCATCGTTAGCGTCTTCCAGTTTTGGCACACCC 1557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634942553908920