Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq9234 430 3e-116 seq17740 232 2e-56 seq15326 167 6e-37 seq9729 127 5e-25 >seq9234 Length=2011 Score = 430 bits (476), Expect = 3e-116 Identities = 1115/1677 (66%), Gaps = 83/1677 (5%) Strand=Plus/Minus Query 31938 GCGGATTGCCGAAATGCTCGGCGAGAAGCCGGCCACGCTGTACAGCTGGAA-GCGGCGCG 31996 || ||| ||||| || |||| | | || | ||| ||||| | ||||| | || || Sbjct 1795 GCAGATCGCCGAGCACCTGGGCGTGCCGGCGTCGACGGTGTACGGTTGGAAAGATGC-CG 1737 Query 31997 ATCGATGGGACGACACCGAGCCGGTCGATCGCGTC----GCGCTGTCGATGGAAGCGCAG 32052 | |||||| ||| | ||||| ||||||||||| |||| | || | || | Sbjct 1736 ACAAATGGGATGACGCGCAGCCGCTCGATCGCGTCAATGGCGCGCTTGAGGTGAG----G 1681 Query 32053 CTGATTCGGCTTGTCGTGAAGGAGAAAAAGGAGGGGCGCGACTTCAAGGAGATCGACCTG 32112 ||||| | ||| || ||||| | | ||| || |||||| ||||||||| ||||| Sbjct 1680 CTGATCCAGCTGATCCTGAAGACGGAGAAGACCGGCGGCGACTACAAGGAGATTGACCTT 1621 Query 32113 CTGACGCGTCAGCTGGACCGGTTGCGCGCACGGCCGGCGAACGATGCGAAGTTG-AGCGA 32171 ||| ||| |||||||| ||||||||| ||| ||| ||||| ||| | Sbjct 1620 CTGGGGCGGCAGCTGGA--------GCGCACGGCGCGCGT-CGA---GAAGTACCAGC-A 1574 Query 32172 CTCCGGGAGTGCGGGCGGCTCG-----------CGCCGTTCGC---GCCGCGCGGACG-- 32215 ||||| | | || | || | ||| | ||| ||||||| || | Sbjct 1573 GACCGGGCGCGAAGGGGACTTGAATCCGAACATCGCGGCGCGCAATGCCGCGCCGAAGCG 1514 Query 32216 --------AGCGCAACGCGTTCAGCGATGAGCAGATCGAGAAGCTC--AACGACGCGTTC 32265 ||||||||| |||||| || ||||||| | ||| ||| | || | Sbjct 1513 CAAGCCCAAGCGCAACGAACTCAGCGCCGACCAGATCGCGCTGCTGGAAACCAAGC--TG 1456 Query 32266 CTCGAATCGATCTTCGACTATCAGCGCAACTGGTATCGCGCCGGCTTCAAGGAACGGATC 32325 | ||| |||| |||| | || | ||||||| ||| | | | | | || | Sbjct 1455 CGCGAGTCGAACTTCCCTTTCCATCAGAACTGGT-TCGATCAGCAGT--ACCAGCGCCTG 1399 Query 32326 CGCAACGTCCTGAAGAGC-CGGCAGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGTT 32384 ||| | ||||||| ||| ||||||||||| ||||||| ||||| ||||||||||| | Sbjct 1398 CGCGCCATCCTGAA-AGCGCGGCAGATCGGTGCGACCTATTACTTTTCGCGCGAGGCGCT 1340 Query 32385 GCTCGACGCGCTGAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGGC 32444 |||| || ||| || ||||| | | ||| ||||||| ||||| ||||| Sbjct 1339 GCTCTCGGCCGCGAAAGAGGGGCGCAACAAGCTTTTCTTGTCGGCGTCGAAGGCGCAGGC 1280 Query 32445 GCACGTGTTCCGCCAGTACATCGTGCAGTTCGCGAAAGACGCGGTCGACGTCGAGCTGAA 32504 ||| ||||||| |||||||| | ||||||||||| |||||||||||| ||||| Sbjct 1279 CCACCAGTTCCGCAGCTACATCGTCGACTTCGCGAAAGA---GGTCGACGTCGACCTGAA 1223 Query 32505 GGGCGACCCGATCGTGCTGCCGAACGGTGCGACGCTGTACTTCCTCGGCACCAACGCGCG 32564 |||||| ||| |||| |||||| || |||| |||||| ||||||||||| Sbjct 1222 GGGCGAGAACATCAAGCTGTGGAACGGCGCCGAGCTGATCTTCCTTGGCACCAACGCCAT 1163 Query 32565 CACTGCGCAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTT 32624 || || |||||||| |||||| || | || ||||| || | || ||||| || ||||| Sbjct 1162 GACGGCCCAGAGCTATCACGGCGACTTCTACTTCGATGAATTTTTTTGGGTCCCACGCTT 1103 Query 32625 CCAGGAGCTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGACCAGTGGCGGCAGACGTA 32684 | | || | |||| | ||| | ||||| ||| | || ||||| |||| || Sbjct 1102 CAGGCAGATCAACAAGCTGGCCAGTGCGATGGCTTCGCACAAGCACTGGCGCAAGACCTA 1043 Query 32685 TTTCTCGACGCCGTCGAGCCTCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTGTT 32744 |||||||||||| ||| | ||||||| || | ||||||| | ||| | Sbjct 1042 TTTCTCGACGCCCTCGGCGATGTCGCACGAGGCCTTCGGGTTCTGGACCGGCGACGACCG 983 Query 32745 CAACCGTGGCCGACCGAAAGATCAGCACGTATCGATCGACATTTCGCACGCGGCGCTG-G 32803 ||| ||||| ||||| | | ||||| ||||||| ||| | |||| | Sbjct 982 GAACAAGGGCCGCGCGAAAAAGGACCACGTCCGCATCGACACCAGCCACAAGATGCTGCG 923 Query 32804 CCGCGGGCCGTTCGTGTCAGGACGGCCAGTGGCGCCAGATCGTCACGGTCGAGGACGCCG 32863 | |||| | | | | | || || | |||||| | ||||||||||| || ||||||| Sbjct 922 CGGCGGCATGCT-GGGCCTCGATCGCAAATGGCGCGACATCGTCACGGTGGAAGACGCCG 864 Query 32864 TGCGCGGCGGTTGCAACAGCGGGGCGCGGCCGCTCTTCAATCTCGACCGGCTACGACTGG 32923 | |||| || || | || ||| || ||| | ||| || || Sbjct 863 T-CGCGATGG--GCTTC------------GATCTGTTCGATATCGCCGAGCTGCGCGAGG 819 Query 32924 AATACAGCCCCGAGGAATACGCGAACCTGCTGCTGTGCCAGTTCATCGACGATTCGCTGT 32983 ||||||||| ||| || | |||||||||| | ||||||||||||||||||| ||| Sbjct 818 AATACAGCCTCGACGAGTTCGCGAACCTGTTCATGTGCCAGTTCATCGACGACAGCTTGT 759 Query 32984 CGGTTTTCCCGCTGACGGTGTTGCAGCCGTGCATGGTCGATACCTGGGAGGTGTGGGACG 33043 || | ||| ||||| || | ||||| | |||||| |||| | ||||||| ||||| || Sbjct 758 CGCTGTTCACGCTGGCGCAGATGCAGGCTTGCATGATCGACAGCTGGGAGATGTGGAGCG 699 Query 33044 ACTTCAAGCCACTGTACCTGCGCCCGTTCGGCGACGAGGAGGTCTGGATCGGCTACGACC 33103 || ||||||| || | | || || | || || ||| ||| |||||||||||| Sbjct 698 ACGTCAAGCCGCTTTGGATTCGGCCCTACGCTCACTTTCCGGTGTGGGTCGGCTACGACC 639 Query 33104 CGTCGCATACGGGCGACAGCGCCG-GCTGCGTGGTGATTGCGCCGCCGAAGCGT-CCGGG 33161 | || | | |||||| ||| | ||| |||||| | ||||||||| |||| || || Sbjct 638 CATCAGACAAGGGCGATGCCGCTGCACTG-GTGGTGGTCGCGCCGCCG-CGCGTGCCAGG 581 Query 33162 CGGGAAGTTCCGCGTGCTCGAGCGGTTCCAGTGGCACGGTTTGGACTTCGAGGCGCAGGC 33221 ||| ||||||||| | || | || |||| | || | |||||||||||||||||| Sbjct 580 CGGCAAGTTCCGCATCCTACATCGCGAGCAGTTCAAGGGCTCGGACTTCGAGGCGCAGGC 521 Query 33222 CGCGCAAATCGAAGCGCTGACGCGGCGCTATCGCGTGACCTACATCGGCATTGACACGAC 33281 || | ||| | | || | || || ||| | |||||||| |||| ||| Sbjct 520 CGAGGCCATCCGTCGGATCACCCAGCAATACAACGTCGTGCATATCGGCATCGACAAGAC 461 Query 33282 CGGGATCGGGCAGGGCGTGTATCAGCTCGTCACGAAGTTTTTCCCGGCCGCGACGCCGTT 33341 ||| | || ||||||| ||| ||||| |||||| || || | || | | Sbjct 460 CGGCCTGGGTGCTGGCGTGTTCCAGATCGTCGAGAAGTTCTTTCCCCAGGTGAAGGGCTA 401 Query 33342 CCACTACTCGGTGGAAATCAAG-ACCGCGCTGGTGATGAAGGCGCAGAACGTGATCCGCA 33400 ||| ||| | || | ||| | ||| |||||| |||||||||| | || |||| || Sbjct 400 CCAGTACAGCATCGAGGTGAAGCAGCGC-CTGGTGCTGAAGGCGCAACAGGTCATCCACA 342 Query 33401 AGGGTCGGCTCGAGTTCGACGCCGGCTGGAACGATCTCGCCGCGTCATTCATGGCGATCA 33460 |||| || || |||||||| || || |||| ||| |||||||| | |||||||| |||| Sbjct 341 AGGGGCGACTGGAGTTCGATGCTGGATGGACCGACATCGCCGCGGCCTTCATGGCCATCA 282 Query 33461 AGAAAACCATCACGCCCAGCGGCCTGCAGGTCACGTACAAGGCGAGCCGCTCGGAAGAAG 33520 || |||| ||||||||| | | || ||| | || ||||||| |||| Sbjct 281 AGCGCGTGCTCACCGCCAGCGGCCGAAACATGACCTACGACTCGGGCCGCTCCGAAGTCA 222 Query 33521 CGAGCCACGGCGATCTCGCCTGGGCGTGCATGCACGCGCTGGCGAACGAGCCGCTCG 33577 || | |||| ||||| || ||||| ||||||||||| | ||||| | |||| Sbjct 221 CGGGACACGCGGATCTTGCGTGGGCAACGATGCACGCGCTCGACAACGAATCACTCG 165 >seq17740 Length=755 Score = 232 bits (256), Expect = 2e-56 Identities = 479/705 (68%), Gaps = 6/705 (1%) Strand=Plus/Plus Query 33760 AGCTGCTCGACTACGTCGAGTGCATGCGCATGGGGAACTGGTACGAGCCGCCGCTGCCGC 33819 ||||||| ||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct 39 AGCTGCTGGACTACGTCGAAAGCATGTTCAACGGTCGATGGTATGAGCCGCCGCTGCCGT 98 Query 33820 TCGACGGGCTCGCGCGTTCGTTCCGGGCCGCGCCGCATCACAGCTCGGCCATCTACGTGA 33879 || || | ||| | ||||||| || ||||||| || |||| || |||| | ||| Sbjct 99 GGGATGGATTGGCGAGCGCGTTCCGCGCGTCGCCGCACCATGGCTCTGCGATCTTCCTGA 158 Query 33880 AGCGCAACATCCTGGTGCAGTCGTACATCGAGCATCCGCTGCTGCCGCGCGCGGACTTCA 33939 |||||||| | || | | || | || ||||||| |||| || ||||| || Sbjct 159 AGCGCAACCTGCTCAAGGCGATGTTCGTCCCCCATCCGCGGCTGTCGAGCGCGACGTTTG 218 Query 33940 GCCGGTTCGTGCTGGAGTACCTGGTGTTCGCGAATAGCTACCTCGAGCGGCGCACGAACC 33999 | | | |||||| | ||| || |||| ||| |||| |||||| || | || | Sbjct 219 GGGCCATGGCGCTGGACTTCCTCGTTTTCGGCAATGCCTACGTCGAGCAGC-CGCGCGCA 277 Query 34000 GGCTCGGCCAGCC-GATGGCGCTGAAATGCTCGCTCGCGAAATACACGCGGGTCGGCGTC 34058 | ||| ||| | ||| |||| | | |||| || || |||||||| ||| Sbjct 278 TTCACGGGGCGCCCGCTGGAGCTGCAGCACGCGCTGGCCAAGTACACGCGCCGCGGGCAG 337 Query 34059 GAGCCGGACCAGTACTGGTTCGTGACGAACGTGCGTGAACC-GCACGCGTTTCCGGCGGG 34117 ||||||| || ||| | |||||| || || || | ||||| |||||| || || Sbjct 338 GAGCCGGGCCGGTATTTCTTCGTG-CGCGGCTGGCTGCAGGAGCACGAGTTTCCAGCCGG 396 Query 34118 CGCCATCTATCACCTGTACGAGCCGGACCTGAACCAGGAGATTTACGGGCTGCCCGAATA 34177 | | | | ||||| |||| ||| | || || ||||| ||||| ||||||| || Sbjct 397 CTCGCTGTTCCACCTTCGCGAGGATGACGTCAATCAAGAGATCTACGGTTTGCCCGAGTA 456 Query 34178 CCTGTCGGCGCTGAACTCGACCTGGTTGAACGAGAGCGCGACGCTGTTTCGTCGGCGCTA 34237 | | |||||| | ||| ||||| | |||||| || || |||| || ||| || Sbjct 457 CATCAGCGCGCTGCAGTCGGCCTGGCTCAACGAGGCAGCCACCATGTTCCGGCGGAAGTA 516 Query 34238 TTACAAGAACGGCAGCCATGCGGGCTTCATCCTGTACATGACCGACCCGGCCGACAAGCA 34297 ||| ||||| || || ||||||||||| ||| || | ||| | | || ||| Sbjct 517 CTACGCCAACGGGTCGCACGCCGGCTTCATCCTCTACCTGTCGGACGCCCAGGTCA-GCA 575 Query 34298 -GGAGGACGTCGACAACCTGCGCGCGGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCC 34356 || |||| || || |||| |||||||||| || ||||| ||||||||||||| Sbjct 576 CGGCCGACGCGGATGCACTACGCGAGGCGCTGAAGGGGGCCAAGGGACCGGGCAACTTCC 635 Query 34357 GGAACCTGTTCATGTACGCGCCGAAGGGCAAGAAGGACGGGATCCAGCTGCTGCCGATCG 34416 | ||||||||| || |||| ||| |||||| || || | ||||| | ||| || Sbjct 636 GCAACCTGTTCCTGCACGCCCCGGGCGGCAAGGCCGAGGGCCTAAAGCTGATTCCGGTCT 695 Query 34417 GCGAGGTGGCGGCGAAGGACGAGTTCTGGAACATCAAGAAGGTGA 34461 |||||| ||||| |||||||| ||| | |||||| || |||| Sbjct 696 CCGAGGTCGCGGCCAAGGACGACTTCGCGGCCATCAAAAACGTGA 740 >seq15326 Length=957 Score = 167 bits (184), Expect = 6e-37 Identities = 271/387 (70%), Gaps = 26/387 (7%) Strand=Plus/Minus Query 31229 CGCCGCGCTGAAGAGGTTGTCGGGGCGCAACTTGCGCGTGTCGAACGCGCGGTTCTTCGC 31288 |||| |||||||||| | |||||| | |||||||| | |||||| | | |||| Sbjct 385 CGCCACGCTGAAGAGATCGTCGGGCTGTTCCTTGCGCGCGGCGAACGGGTTGGCTTTCGG 326 Query 31289 ---GCTGAAGGCGA------GCATCTCCGTGCCGAGGCTCGCCGGGTTGTCGGTGACGGC 31339 |||| |||| |||| || ||||||||||| || ||||||||||||||||| Sbjct 325 ATTGCTGGCCGCGAACTGCAGCATTTCAGTGCCGAGGCTGGCAGGGTTGTCGGTGACGGC 266 Query 31340 GAGGCCGACGAGGTACGCCTCGCCGGTGCCGGCGAAATCCGGATCGACTTCCATCGACGT 31399 ||||||| || || |||| | ||||| ||||||| | ||| ||||| | ||| | Sbjct 265 CAGGCCGATCAGATAGGCCTTGTCGGTGTCGGCGAACTTCGGCCGCACTTCGAGCGAGCT 206 Query 31400 GTAGACCTTCTGGCGCTGCTCGGTCGTCATCGCAATCAGGTCTTTCGTCGGCGAGAGCTG 31459 ||||| ||||||||||| || | | ||||| ||||| || | || || |||| ||| Sbjct 205 GTAGATCTTCTGGCGCTTCT---TGTTGATCGCGATCAGTTCGTCGGTGGGAGAGATCTG 149 Query 31460 CGC---GAACAACCGCATCTTTCCG---------TCCTGCTCTTCGGCCTTCAGCGCGAT 31507 ||| || || |||| || || |||||||| ||| | ||| | Sbjct 148 CGCATAGAGGGCGAGCTTCTTGGCGCCGCCGATCTCGACCTCTTCGGTCTTGACCGCCAG 89 Query 31508 CACGTCGCCGTACGCGCGGAATGCGC-CATCCGGATAGAGCCCGCGAATGTGTTCCATGT 31566 ||||||||| ||||||| |||| ||| || || | || ||||| ||||| ||||||| Sbjct 88 CACGTCGCCATACGCGCCGAATTCGCTGCTCGGGCTGTAG-CCGCGGATGTGCTCCATGT 30 Query 31567 TGATGCGCGCGCCGTATACCGCCGGGT 31593 | | ||| || ||||| || | ||||| Sbjct 29 TCACGCGGGCTCCGTAGACGGTCGGGT 3 >seq9729 Length=1888 Score = 127 bits (140), Expect = 5e-25 Identities = 478/722 (66%), Gaps = 47/722 (7%) Strand=Plus/Plus Query 13227 GTTCAGCTTCTCGTTTTTGTGAATCTGCTCGCGCTGCATGTACATCGTCGCGAACAGATT 13286 ||| |||||| |||| ||||| ||||| |||||||||| ||||||| || |||||||| Sbjct 317 GTTTAGCTTCGCGTTCTTGTGGATCTGGTCGCGCTGCAGGTACATCTGGGCAAACAGATT 376 Query 13287 CG-CGCCGTTGCCGTTCGTCATGATCGTGGAGAATTCCTCCAGAATCTTGG-CGTCCGAC 13344 || ||| || || ||| | | ||| || || || || | |||| | | Sbjct 377 CGACGCAGT-GCGGTTGCTAAAGATGCTGCCGATCGTGTCGAGGA-CTTGCTCCTTTTCA 434 Query 13345 GTGATGCCCTTGGCTTTCAGCTTCGGCAGCAGCACCTTCTCCATCCATTCGAACGGCGAC 13404 ||||||||||| ||||| || || || |||| ||||||||||||||| | | Sbjct 435 GTGATGCCCTTTTGTTTCAAAGCAGGTAGAAGAACCTGTTCCATCCATTCGAACTG-GTT 493 Query 13405 GCGTT--GAACAGCTC---CCCCTGGATCAGCGCACCGGGCTT--GATGCGCTTCACGTT 13457 | ||| ||| ||||| ||||| || |||| || || || || ||| || | Sbjct 494 G-GTTCGGAATAGCTCGCTCCCCTTGA---GCGCGCCAGGGTTCAGAAACGC--CAACTG 547 Query 13458 ACCGATGGTGTTGT-ATTCGACTGACTTCTT---GTCGACGAGG---CCCAGCTCGACCA 13510 ||| | |||| || |||| | |||| ||| ||| |||||| | | | Sbjct 548 ACCA---GCCTTGTCATGCGACAG-CTTCGACGGGTCTCCGATCAACCCCAGCGCCTCGA 603 Query 13511 GGCGCTTCGCGGCGCGCACGGTGGTCTTGCCTTGCATCAGGTTGCTGTACGCCG-CTTGC 13569 | ||| || || || ||||||||| ||||| ||||| ||| || | | || Sbjct 604 TGTTCTTGGCTGCTCGTTTGGTGGTCTTTCCTTGGTAGAGGTTCTGGTATGCGGACATGG 663 Query 13570 ACACCGGTGCCGGCCGCATGCCCGCCCATTTC-CTGAATCAGCGGTTCCATCTGGTAGTA 13628 | |||||| | | ||||||||| || |||| | || | || | |||||||| Sbjct 664 TGGC-GGTGCCAACTCGGTTCCCGCCCATCTCGCTGA-TGAGTGCCTCGAGTTGGTAGTA 721 Query 13629 GAACGC---GTCCT---GGCGCATCTGCTTTGCAGCGACCTTGCCGGTCTGGATGAAGTT 13682 | || ||| | ||| || |||||||| || || || | ||||||||| Sbjct 722 CATGGCCGAGTCGTTAAGGC----CT--TTTGCAGCTACGCCACCAGTTTTGATGAAGTT 775 Query 13683 CCGCCATTCGTCGCCGCCGACGCGTCCACCGGTCGCGGTCAGCACCTGCTGAACCATGTT 13742 ||||||| || |||||| || || || ||||| || | ||| |||| ||||||| Sbjct 776 GAGCCATTCTTCCGGGCCGACCCGCCCGCCCGTCGCCGTGATGACCCGCTGCACCATGTC 835 Query 13743 CGCTTCTTTGATGAACGCTGCCTCGGATTTCGTGCC-GCCGCGCAGCTCGATCACCTTCA 13801 ||| | | | |||| | || | | ||| ||||||||| ||||| || || Sbjct 836 CGCCTGATCGGTGAAGGTCTTTTCAC-TGGCAAGCCCGCCGCGCAGTTCGATGACGCGCA 894 Query 13802 GCATGTTCATGAACTTCTCTTCGTTTTCGTGCCCCTGGCCGGCGCCGAACATCGCCTCGT 13861 |||||| | |||||| |||||| || | ||| | |||| ||||| || || Sbjct 895 GCATGTCGAGAAACTTCCGTTCGTTGTCTTTCCCGCTCTCTTCGCCAAACATTGCAGTGT 954 Query 13862 TCGCGAACTTCATCTTCGCGAGCGTCGGCATCACCATCTGCGCGTGATGCTCGTCCGCGA 13921 | || || |||||||| ||||| || ||||||||||||| ||||||||| |||| || | Sbjct 955 TGGCAAATTTCATCTTGGCGAGGGTGGGCATCACCATCTCGGCGTGATGCACGTCGGCAA 1014 Query 13922 AG 13923 || Sbjct 1015 AG 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118999727724388