Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq19355 95.1 3e-15 >seq19355 Length=665 Score = 95.1 bits (104), Expect = 3e-15 Identities = 236/353 (67%), Gaps = 14/353 (4%) Strand=Plus/Minus Query 30840 GCGCTTCGAGAAGCGCATGTAGGTCTTCGACCCGATCACCCGGATCGCATCGCGGATCGC 30899 ||||| |||| |||| |||||||| || | |||| | ||| |||| ||| || Sbjct 596 GCGCTCGTAGAACCGCACATAGGTCTTGCTGCCCACCACCGTCACCGCGTCGCTGATGGC 537 Query 30900 GCGCATCGCCTCCTGCCAGCGCGGGTCCTCGATCTCGAGGCGCAGCAGCATGAAGACTTC 30959 |||||||| |||||||||||| || |||| || |||||| ||||| || || || Sbjct 536 CTTCATCGCCTGCTGCCAGCGCGGATCATCGAACTTGAGGCGATGCAGCGAGAGCACCTC 477 Query 30960 GGAGCGGTTGATCTGGCCTTCCTTGTCGGTGTTGAAGGCGCGCGTGACGATCGCACGGAT 31019 | | ||||| ||| |||| | | |||||||||| |||| | | || | Sbjct 476 GCCGGTCTTGATGCTGCCGTCCTGGCCCACCTTGAAGGCGCTATTGACCAAGGTGCGCAG 417 Query 31020 CTCGGGACGGCTGTCGGCCGCCCATTCGTTCAGACACTCGTCGATCAGTCCCTTCGCAAC 31079 |||| ||| | | | | ||| |||||||| ||||| ||||| || |||| || | Sbjct 416 TTCGGCTCGGGAGCCTTCGGTCCAGTCGTTCAGGCACTCATCGATGAGGGCCTTGGCCGC 357 Query 31080 CTGCA---GCTCGGGGCCGAA--GGTCAGCAG--ATCGGAGACGCGAACCTCGATCTTGA 31132 ||||| |||| | |||| || | | | | | || |||| | ||||||| Sbjct 356 CTGCAGGCGCTC---GTCGAATTGGATA-CTGTCCTGGCAGGCGCG---CAGGATCTTGT 304 Query 31133 AGAGGCCGTCATGGGTCAAGTAGGTCTTGTTGCCCTTCGCGCCGCCGATCTTG 31185 || ||||||| | ||| | | || ||||||||| |||||||||| ||| Sbjct 303 AGCGGCCGTCGTAGGTGTACAGGCTCACGTTGCCCTTGTCGCCGCCGATTTTG 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126475999666210