Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq5 104 9e-18 >seq5 Length=40538 Score = 104 bits (114), Expect = 9e-18 Identities = 129/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 11352 AAGATTATGGTCAACGGTTCGTTCGGTAAGTTCGGCTCAAAATACGCCAAGATCTACTCG 11411 ||||| | | |||||||||| |||||||||||||| ||| || | | | || || Sbjct 15361 AAGATCACGATCAACGGTTCATTCGGTAAGTTCGGTTCACCCTATTCAATTCTGTATTCC 15420 Query 11412 CCTGACCTT-CTCATCCAGACCACCGTGACCGGCCAGCTTGCCTTGCTGATGCTCATTGA 11470 || || || || ||||||||||| | ||||| ||||| | ||||| ||| | ||||| Sbjct 15421 CCA-ACGTTGCTGATCCAGACCACGATCACCGGGCAGCTGTCATTGCTTATGTTGATTGA 15479 Query 11471 GTGGATGGAAGAGGAAGGCATCAGCATTGTCTCGGCCAACACGGACGGCATCGT 11524 | |||||| ||||| ||||| |||| ||||| ||||| |||||||| || Sbjct 15480 ACGACTGGAAGCTGAAGGTATCAGTGTTGTTTCGGCAAACACCGACGGCATTGT 15533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182092168989520