Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq19355 95.1 3e-15 >seq19355 Length=665 Score = 95.1 bits (104), Expect = 3e-15 Identities = 236/353 (67%), Gaps = 14/353 (4%) Strand=Plus/Plus Query 8585 CAAGATCGGCGGCGCGAAGGGCAACAAGACCTACTTGACCCATGACGGCCTCTTCAAGAT 8644 ||| |||||||||| ||||||||| || | | ||| | ||||||| || |||||| Sbjct 251 CAAAATCGGCGGCGACAAGGGCAACGTGAGCCTGTACACCTACGACGGCCGCTACAAGAT 310 Query 8645 CGAGGTTCGCGTCTCCGAT--CTGCTGACC--TTCGGCCCCGAGC---TGCAGGTTGCGA 8697 | | |||| || | | | | | || |||| | |||| |||||| || | Sbjct 311 CCTG---CGCGCCTGCCAGGACAG-TATCCAATTCGAC---GAGCGCCTGCAGGCGGCCA 363 Query 8698 AGGGACTGATCGACGAGTGTCTGAACGAATGGGCGGCCGACAGCCGTCCCGAGATCCGTG 8757 ||| || ||||| ||||| |||||||| ||| | | | | ||| |||| | || Sbjct 364 AGGCCCTCATCGATGAGTGCCTGAACGACTGGACCGAAGGCTCCCGAGCCGAACTGCGCA 423 Query 8758 CGATCGTCACGCGCGCCTTCAACACCGACAAGGAAGGCCAGATCAACCGCTCCGAAGTCT 8817 | | |||| |||||||||| | | |||| ||| ||||| | ||| || Sbjct 424 CCTTGGTCAATAGCGCCTTCAAGGTGGGCCAGGACGGCAGCATCAAGACCGGCGAGGTGC 483 Query 8818 TCATGCTGCTGCGCCTCGAGATCGAGGACCCGCGCTGGCAGGAGGCGATGCGCGCGATCC 8877 || ||||| |||||| || |||| || |||||||||||| |||||||| || ||| Sbjct 484 TCTCGCTGCATCGCCTCAAGTTCGATGATCCGCGCTGGCAGCAGGCGATGAAGGCCATCA 543 Query 8878 GCGATGCGATCCGGGTGATCGGGTCGAAGACCTACATGCGCTTCTCGAAGCGC 8930 |||| ||| | |||| | || |||||||| |||| |||| ||||| Sbjct 544 GCGACGCGGTGACGGTGGTGGGCAGCAAGACCTATGTGCGGTTCTACGAGCGC 596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128581000495358