Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq11176 118 2e-21 seq4840 116 7e-21 >seq11176 Length=1573 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| || ||||| || | || |||| || || || |||||||| | || | Sbjct 678 ATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGTCGC 619 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || ||||| || ||||| || || ||| ||||| |||| | Sbjct 618 TGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTTTCGATAGTA 559 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || ||||| || || ||||||||||| || || || || | ||| |||||| Sbjct 558 TCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACAAAAATCTGC 499 Query 192535 ATT 192537 ||| Sbjct 498 ATT 496 >seq4840 Length=3826 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454 |||| ||||| || || | ||| ||||| || ||||| |||||||| || |||||||| Sbjct 2412 TACCTGCAAAAATCAACCGCTGCTGATCTGGAGGTATGCCTTCTTTGTCCTGTATTTTCG 2471 Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||||||| || | |||||| ||||| || || || ||||| ||||||||||||| Sbjct 2472 CTTTTACATTCTCAATTGTATCTGAGGATTCGACCTCAAGCGTAATCGTTTTACCAGTTA 2531 Query 192515 ATGTTTTAATAAATATCTGCAT 192536 | ||||| | ||| || ||||| Sbjct 2532 AAGTTTTGACAAAAATTTGCAT 2553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984177739105050