Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq22613 111 5e-20 >seq22613 Length=539 Score = 111 bits (122), Expect = 5e-20 Identities = 213/312 (68%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 39363 TCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCC 39422 ||||| | |||||| ||| ||||| |||| | || || | || ||| || || Sbjct 92 TCGGCCGTGTAGTGGACCTTGAGCCAGCCCGTATGATAGGCCAGCAGCGAGTAGGCGGCG 151 Query 39423 GAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAACGGGACCAGCACGTCCCACACTGCCTGG 39482 | ||||| |||||||||| ||||||| |||||| ||| || ||| | | || | Sbjct 152 GCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGAT---CTCG 208 Query 39483 ATGGCACCGTCC---GAGTAGCCTCGCTCGCGC---GCTCCCTTCTGGAAGTTCACGAAC 39536 ||| |||| | | ||| || || | || ||| |||| ||| || Sbjct 209 TCGGCCTTGTCCTGCGCGATGCCGTGCGTGCTCAGGGCGCCCGCGCGGAATTTCTCGCGG 268 Query 39537 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGA 39596 | || ||||| ||||| ||||||||||||||||||| ||||| ||||||||||| Sbjct 269 TGCTCGGCCATCTCCTCGAGCTTCTTCTTGCCCATCGCGCGGCGCAGCAGGTCGGCGCCG 328 Query 39597 CCGAGGGTGTACCCGGCCATGACCTGCGCAACCTTCTGCACCTGCTCCTGGTAGATGATG 39656 ||||| | || ||| ||| || |||||| || | ||||||||||||||||| ||| Sbjct 329 CCGAGCGAATAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCTCCTGGTAGACCATG 388 Query 39657 AGCTGGAAGGTC 39668 | | | ||||| Sbjct 389 ATCCCGTAGGTC 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163838164838884