Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq22613 95.1 4e-15 >seq22613 Length=539 Score = 95.1 bits (104), Expect = 4e-15 Identities = 199/295 (67%), Gaps = 9/295 (3%) Strand=Plus/Plus Query 39111 TCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCC 39170 ||||||| |||||| ||| | ||| |||| | || || | || ||| || || Sbjct 92 TCGGCCGTGTAGTGGACCTTGAGCCAGCCCGTATGATAGGCCAGCAGCGAGTAGGCGGCG 151 Query 39171 GAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACACTGCCTGG 39230 | ||||| |||||||||| ||||||| ||||| ||| || ||| | | || | Sbjct 152 GCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGAT---CTCG 208 Query 39231 ATGGCACCGTCC---GAGTAGCCTCGCTCGCGC---GCTCCCTTCTGGAAGTTCACGAAC 39284 ||| |||| | | ||| || || | || ||| |||| ||| || Sbjct 209 TCGGCCTTGTCCTGCGCGATGCCGTGCGTGCTCAGGGCGCCCGCGCGGAATTTCTCGCGG 268 Query 39285 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGA 39344 | || ||||| ||||| ||||||||||||||||||| ||||| ||||||||||| Sbjct 269 TGCTCGGCCATCTCCTCGAGCTTCTTCTTGCCCATCGCGCGGCGCAGCAGGTCGGCGCCG 328 Query 39345 CCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399 || || | || ||| ||| || ||| || || | ||||||||||||||||| Sbjct 329 CCGAGCGAATAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCTCCTGGTAGA 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163278324192834