Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_021775.1 Length=42215 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 1e-13 >seq5 Length=40538 Score = 89.7 bits (98), Expect = 1e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1321 ATCCAGGAACCAGCACTGGCCCCACAGGTCTTTCAGGCCATTAGGCGCTGGCGTACCGGT 1380 ||| || ||||| || |||||||| || | || ||| || || | || |||||||| Sbjct 19258 ATCAAGAAACCATGCTTGCCCCCACAGATCCTGCAAGCCGTTCGGTGACGGTGTACCGGT 19199 Query 1381 CAGATTAATGAAGCGCTTAATCTTCTTGTGCGCCACCTTGCCGAGCGCCCGTGCGCGTTT 1440 ||| | |||||| ||| | | ||||| ||| || | || | || | || || || Sbjct 19198 CAGTTCAATGAATCGCCGCACCCTCTTGAACGCAACACTACCCAAAGCTTGCGCACGCTT 19139 Query 1441 ACTACCGCCACGACTACGGAACGACTTCAGCTTGGTGGATTCATCGGCAACAATGACCGT 1500 || ||| || ||||| ||||||||||| ||||||||||| ||||| | || Sbjct 19138 ACCACCTTGCCGCAGGCGGAATGACTTCAGCTTTGTGGATTCATCAGCAACCACTTTGGT 19079 Query 1501 GAACGGCCAGCGGTCACCCCAGAATTCGACGAGCCAC 1537 ||||||||| || ||| || ||| || |||||| Sbjct 19078 GAACGGCCACTTGTTACCTAAGTGTTCTACCAGCCAC 19042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134927993876862