Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11176 116 2e-21 >seq11176 Length=1573 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||||||||||| ||||| || || | |||| | || Sbjct 708 AGAACCAGGTGCAGCGTCGATTCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCC 649 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||||||||| ||||| ||| | || | || |||||||| Sbjct 648 TCCAGCTGCTTGCCCGCAAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCT 589 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | | || | ||| ||||| || || | |||||||| Sbjct 588 TGAATCTTTGCTTTGACATTTTCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTT 529 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | ||||||||||| |||||||| Sbjct 528 TTACCCGTCAAAGTCTTTACAAAAATCTGCAT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325597681723097