Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq17973 89.7 1e-13 >seq17973 Length=741 Score = 89.7 bits (98), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 30155 CCCTCGACGTACAGTTGCTGACCCTTCTTTACGTGCTGCCCGACGATCTCCGCCAACTTC 30214 || |||||||| | ||| ||||| | || |||| || |||| || |||| Sbjct 11 CCTTCGACGTAGATCTGCGAGCCCTTGCGCAGGTACTGCGCGGCGATTTCGGCCAGGCGG 70 Query 30215 CCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCC 30274 ||| |||||| | |||||||| |||||| || | || |||| | ||||||||| Sbjct 71 CCGTTGAACACGAGACGGTGCCACTCGGTGGCTTCGCGCATCTCGCCGCTTTGCTTGTCC 130 Query 30275 TTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCG-TTGGGCATATA 30333 ||||| | ||| |||| |||||||| |||| ||| | |||| | ||| | || Sbjct 131 TTCCACTTGTCGGTGGTCGCGAGGGTCGCGTTGCAGACCTGGTCGCCGCTCGGGAAGGTA 190 Query 30334 GCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAAC 30384 || ||||| || || | |||| |||||| || || ||||||||||| || Sbjct 191 -CGGGTTTCGGGATCGCGGCCGAGGTTGCCGACGAGGATGACTTTGTTGAC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145596957045872