Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_024146.1 Length=56702 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 1e-15 >seq5 Length=40538 Score = 96.9 bits (106), Expect = 1e-15 Identities = 137/185 (74%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 574 TTAATAACAATACCGTCCGTGTTAGCACTGACAAC-CTGAATACCGTTAAGCT-CTAGTG 631 ||||||||||| ||||| ||||| || ||||| |||| |||| || |||| | ||| Sbjct 15539 TTAATAACAATGCCGTCGGTGTTTGCCGAAACAACACTGA-TACC-TTCAGCTTCCAGTC 15482 Query 632 TTTCAATAAGCATGAGCAGAGCTAACTGACCTGTGAGCGTAGTCTGAATAAT-AAGGTGC 690 |||||| | ||| |||| | | ||| || |||| ||| ||||| || | || || Sbjct 15481 GTTCAATCAACATAAGCAATGACAGCTGCCCGGTGATCGTGGTCTGGATCAGCAACGTTG 15422 Query 691 GGTGCATACAGAATAGAGAACGGTGAACCGAACTTACCATAAGAACCGTTAATAACGATC 750 || | ||||||||| || | ||||||||||||||||| | |||||||| || |||| Sbjct 15421 GG-GAATACAGAATTGAATAGGGTGAACCGAACTTACCGAATGAACCGTTGATCGTGATC 15363 Query 751 TTAAG 755 || || Sbjct 15362 TTCAG 15358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181273202101584