Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq9729 372 8e-99 seq9234 349 9e-92 seq17740 325 1e-84 seq15326 190 5e-44 >seq9729 Length=1888 Score = 372 bits (412), Expect = 8e-99 Identities = 578/819 (71%), Gaps = 15/819 (2%) Strand=Plus/Minus Query 27220 GTTCGCCCAGAAGATGCAGGCCTACGGCGTCAGCCAGGTCGAGAAGGCCGAGCTGATGCG 27279 || ||| ||| ||| || ||| |||| |||| | || || || | |||||| Sbjct 1091 GTACGCGCAGCGCATGAAGACCTTCGGCACCAGCATGAATGACAACCTCGGGTTGATGCT 1032 Query 27280 CGACGCCATGAGCGTGTTCGCGGACACGCATCACGCCGAGCTGGTGATGCCGACGCTCGC 27339 || || | || | || || ||| ||||||||||||| |||||||||| || ||||| Sbjct 1031 GGATGCAACGACTGCCTTTGCCGACGTGCATCACGCCGAGATGGTGATGCCCACCCTCGC 972 Query 27340 CAAGATGAAGTTCGCCAACGCAGCCGTGTTCGGCCAGGCCGAGGGCGCG---GAGAACGA 27396 ||||||||| || |||||| | || |||| ||| | | || ||| | || ||||| Sbjct 971 CAAGATGAAATTTGCCAACACTGCAATGTTTGGCGAAG---AGAGCGGGAAAGACAACGA 915 Query 27397 GCGCAAGTTCGTGGACATGCTCAAGGTGATTGAGCTGCGCGGCGGCTTGGCGAGCGA--- 27453 || ||||| | |||||||| || || || ||||||||||| | || || || Sbjct 914 ACGGAAGTTTCTCGACATGCTGCGCGTCATCGAACTGCGCGGCGGGCTTGCCAGTGAAAA 855 Query 27454 GGCCGAGTTCAAGAAGCAGGCCGACATGGTGCAGAAGGTCATCACGGCGACCGGCGGGCG 27513 | || |||| | ||||| |||||||||||| ||||||||||||||| |||||||| Sbjct 854 GACC---TTCACCGATCAGGCGGACATGGTGCAGCGGGTCATCACGGCGACGGGCGGGCG 798 Query 27514 CGTGCAGGCTGACGAATGGCTCAACGTCATCAAGGCTGGTGGCCTCGCTGCCAAGGGCGC 27573 || | || |||||||||||| ||||||| |||||||| | ||||| || ||| Sbjct 797 GGTCGGCCCGGAAGAATGGCTCAACTTCATCAAAACTGGTGGCGTAGCTGCAAAAGGCCT 738 Query 27574 CGACGACAAGGCGTTCTACTACACGCTGGAACCGCTGGTGCAG-GAGATGGGCGGCAACC 27632 ||||| ||| | |||||| || || | || | ||| ||||||||||| |||| Sbjct 737 TAACGACTCGGCCATGTACTACCAACTCGAGGCACTCAT-CAGCGAGATGGGCGGGAACC 679 Query 27633 GCGTGGGCACCGCCATGATGAGCGCCTATCAGAATCTGTACCAAGGCAAGACGACGAAGC 27692 | || |||||||||| ||| ||| || ||||| || |||||||| ||||| || || | Sbjct 678 GAGTTGGCACCGCCACCATGTCCGCATACCAGAACCTCTACCAAGGAAAGACCACCAAAC 619 Query 27693 GGGCGCTGCACAACCTGGACAAGTTCGGCCTGATCGCCGACCGGAGCAAGGTGCAGGAGG 27752 | || | ||| | || | | || |||||| |||| | ||| || | | | Sbjct 618 GAGCAGCCAAGAACATCGAGGCGCTGGGGTTGATCGGAGACCCGTCGAAGCTGTCGCATG 559 Query 27753 ACAAGGCCGGCCAGGTGTCGTTCATGGACCCAGGCGCGCTGAAGGGGGCGGACCTGTTCC 27812 ||||||| || ||| || |||| || |||| |||||||| |||||| || || |||| Sbjct 558 ACAAGGCTGGTCAGTTGGCGTTTCTGAACCCTGGCGCGCTCAAGGGGAGCGAGCTATTCC 499 Query 27813 GTCAGAACCAATTCGCGTGGCTGGAGAAGGTGCTGCTGCCGACGCTGGCCGCCAAGGGCA 27872 | ||||| |||| ||| |||| |||| || || || | || ||||||| Sbjct 498 GAACCAACCAGTTCGAATGGATGGAACAGGTTCTTCTACCTGCTTTGAAACAAAAGGGCA 439 Query 27873 TCACCGACCGCAAGCAGGTCGAGGACGCCATCGGCAGCATCTTCTCCAACCGCACGGCGG 27932 |||| || |||| ||| ||| | |||||||||||||| ||||||||| ||| Sbjct 438 TCACTGAAAAGGAGCAAGTCCTCGACACGATCGGCAGCATCTTTAGCAACCGCACTGCGT 379 Query 27933 CGGGCCTCTTCGCGCAGATGTACCTGCAGCGCCAGCAGATCCACAAGAACATGCGGCTGA 27992 || || || || |||||||||||||||||| | ||||||||||||||| | ||| | Sbjct 378 CGAATCTGTTTGCCCAGATGTACCTGCAGCGCGACCAGATCCACAAGAACGCGAAGCTAA 319 Query 27993 ATGAAGGTGCTGCTGGCATCGATCAGCTTGA-AGCCAGG 28030 | | ||||||| ||||||| ||||| || ||| ||| Sbjct 318 ACGCCGGTGCTGATGGCATCACACAGCTCGACAGCAAGG 280 >seq9234 Length=2011 Score = 349 bits (386), Expect = 9e-92 Identities = 915/1387 (66%), Gaps = 37/1387 (3%) Strand=Plus/Plus Query 8894 ATGGACATGAACGACGCGGCGAAGTCCGCCCAGCCGGCGTCGAACTCCAGCCGGCCCTTG 8953 |||| |||||| | |||||||| ||| | ||| || || ||||||||||| || |||||| Sbjct 284 ATGGCCATGAAGGCCGCGGCGATGTCGGTCCATCCAGCATCGAACTCCAGTCGCCCCTTG 343 Query 8954 CTGATCACGTCGTGCGCCTTGAGCACCAGGGCGGTT-TTCACTTCCACGGAATAGGTGAA 9012 ||| || | |||||||| ||||||||| || | ||||| || | | || | | Sbjct 344 TGGATGACCTGTTGCGCCTTCAGCACCAGG-CGCTGCTTCACCTCGATGCTGTACTGGTA 402 Query 9013 GCCTTCGGCGTCCGGGCGGAACTTCTGCACCAGGCGGAACACCGCATCGCCGATGCCGGT 9072 ||| | | | || |||||||| || | ||||||| || | || | |||||| Sbjct 403 GCCCTTCACCTGGGGAAAGAACTTCTCGACGATCTGGAACACGCCAGCACCCAGGCCGGT 462 Query 9073 CCGGTCGATGCCCACGTAGGCGACGTTGTAGCGCTCAGTGACGCGCCGGATGGCGCCGGC 9132 | ||||||||| | | |||||||||| ||| |||| || |||||||| |||| Sbjct 463 CTTGTCGATGCCGATATGCACGACGTTGTATTGCTGGGTGATCCGACGGATGGCCTCGGC 522 Query 9133 CTGTTCCTCGTAGTCGATGCCGCGGAACTGGTGCCGCTCCAGCACGCGGAACTTGCCGCC 9192 ||| ||||| |||| ||| |||||| | || | || | ||||||||||||||| Sbjct 523 CTGCGCCTCGAAGTCCGAGCCCTTGAACTGCTCGCGATGTAGGATGCGGAACTTGCCGCC 582 Query 9193 CGGCACCAGGGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGG 9252 ||||| | ||||| || Sbjct 583 TGGCACGCGCGGCGGCGCGACCACCACCAGTGCAGCGGCATCGCCCTTGTCTGAT---GG 639 Query 9253 GTCGTAGCCGACCCACACCGGCCGGTTGCCGAACGGCCGCGGCGCGAACGGCCGGAAGTC 9312 ||||||||||||||||||||| || || | ||||| | | |||| || ||| Sbjct 640 GTCGTAGCCGACCCACACCGGAAAGTGAGCGTAGGGCCGAATCCAAAGCGGCTTGACGTC 699 Query 9313 CTCCCATACTTCCCAGGTGTCCACCATCCCGCGCATG-AGCATCGAGAGCGGAAACACGG 9371 ||| | |||||| |||| | ||| | || || | | || |||| |||| | Sbjct 700 GCTCCACATCTCCCAGCTGTCGATCATGCAA-GCCTGCATCTGCGCCAGCGTGAACAGCG 758 Query 9372 ACGCGTTGTCGTCGATGAACGCGCACATCAGCAGGTTGGCGAAATCGAGTTCGCTGTACT 9431 || | |||||||||||||| |||||| | |||||| ||||| ||| |||||| | Sbjct 759 ACAAGCTGTCGTCGATGAACTGGCACATGAACAGGTTCGCGAACTCGTCGAGGCTGTATT 818 Query 9432 CCAGCCGCAACTGGTCGATGTCGAACAGGTTGCAG-CCGCCGCGCAGCGCGTCCTCTACC 9490 || |||| || | |||| |||||||| | | || || |||| | ||||| || ||| Sbjct 819 CCTCGCGCAGCTCGGCGATATCGAACAGATCGAAGCCCATCGCG-ACGGCGTCTTCCACC 877 Query 9491 GTCACGATCTGGCGCCACTGACCGTCAGCGCAGCGCATGCCGTTGCGCAGCGCGGTGTGG 9550 || ||||| | |||||| | | || || |||||||| ||||||| ||||| Sbjct 878 GTGACGATGTCGCGCCATTTGCGATCGAGGCCCAGCATGCCGCCGCGCAGCATCTTGTGG 937 Query 9551 CTCACGTCGATCTTGACCTGTTTGTCCTTGGCCTTGCCGCGGTTGAACAG---TGCGCCG 9607 || |||||| ||| || |||||| | || || ||| | | ||||| Sbjct 938 CTGGTGTCGATGCGGACGTG---GTCCTTTTTCGCGCGGCCCTTGTTCCGGTCGTCGCCG 994 Query 9608 GACCAGAACGGGTAGGCCTCATGCGACAAGCTGGACGGCGTGGAGAAGTACGTTTGCCGC 9667 | ||||||| | ||||||| ||||||| || ||||| ||||| || || | ||| Sbjct 995 GTCCAGAACCCGAAGGCCTCGTGCGACATCGCCGAGGGCGTCGAGAAATAGGTCTTGCGC 1054 Query 9668 CAGTGCTTGTGGATCGCCATGCCGGAC--GCGACCTTGCGCAGTTCCTGGAAGCGCGGCA 9725 ||||||||||| ||||| || || || | |||| | | | |||||| || | Sbjct 1055 CAGTGCTTGTGCGAAGCCAT--CGCACTGGCCAGCTTGTTGATCTGCCTGAAGCGTGGGA 1112 Query 9726 CCCAGAAGTACTCGTCGAAGTACAGGTTGCCGTGGTAGCTCTGCGCGGTGCGGGCGTTGG 9785 |||| || | || |||||||| | || |||||| |||||||| || || |||||||| Sbjct 1113 CCCAAAAAAATTCATCGAAGTAGAAGTCGCCGTGATAGCTCTGGGCCGTCATGGCGTTGG 1172 Query 9786 TCCCGAGGAAGTACAGCGTCGCCCCGTTGGGCAACACCATCGGGTCGCCCTTCAGCTCGA 9845 | || |||||| |||| || ||||| || | || ||||||||||| |||| Sbjct 1173 TGCCAAGGAAGATCAGCTCGGCGCCGTTCCACAGCTTGATGTTCTCGCCCTTCAGGTCGA 1232 Query 9846 CGCCGGCTGCGTCCTTCGCGAATTGGATGATGTA-CTGCTTGAAGACGTGCGCCTGTGCC 9904 || || | || |||||||| | || |||||| |||| ||| ||| ||||| ||| Sbjct 1233 CGTCG---ACCTCTTTCGCGAAGTCGACGATGTAGCTGC-GGAACTGGTGGGCCTGCGCC 1288 Query 9905 TTGCTGGCCGATAGAAAAATCTGGTTGCGGCCAGTGGTCAGCGCGTCGATGAACGCCTCG 9964 || ||||| | |||| || |||||| || || || || | ||||||| Sbjct 1289 TTCGACGCCGACAAGAAAAGCTTGTTGCGCCCCTCTTTCGCGGCCGAGAGCAGCGCCTCG 1348 Query 9965 CGTGCGAAGTACCACGTCGCGCCGATCTGCCG-GCTCTTGAGCAGGTTGCGGATGCGCTC 10023 || | ||||| | ||||| ||||||||||| ||| || || | | ||| | ||||| Sbjct 1349 CGCGAAAAGTAATAGGTCGCACCGATCTGCCGCGCT-TTCAGGATGGCGCGCAGGCGCTG 1407 Query 10024 GACCTGCCCAGCCTCGTACCAGACGCGCTGGTAATCGAACATCGAGTCGCGGA---AGGC 10080 | |||| | ||| ||||| | ||| || ||| |||| ||||| | || Sbjct 1408 GTACTGCTGA---TCGAACCAGTTCTGATGGAAAGGGAAGTTCGACTCGCGCAGCTTGGT 1464 Query 10081 CTCCAGGAGCTGCG-TCTGTTCCTCGGGGCTGATCGCGTTGCGCTCGGGCTTGCTGCGCG 10139 ||||| ||| ||| |||| |||| ||||| ||||||||| |||||||| || Sbjct 1465 TTCCAGCAGC-GCGATCTG---GTCGGCGCTGAGTTCGTTGCGCTTGGGCTTGCGCTTCG 1520 Query 10140 GTCCCTTGTTGCGATTCGCCACCTTCGGGTTCAGGTCGGTTTCGTTGCCGCTGGCTTCGT 10199 | | ||||| ||| | ||||| |||| ||| |||| ||| | | || Sbjct 1521 GCGCGGCATTGCGCGCCGCGATGTTCGGATTCAAGTCCCCTTCGCGCCCGGTCTGCTGGT 1580 Query 10200 ACCGGCGCACGCGCGCCATGCGCTCCATTTGTCGGCCGAGCAGGTCGATTTCCTTGTAGT 10259 || ||||||||| ||||||||| || || || || ||||| || |||||||||| Sbjct 1581 ACTTCTCGACGCGCGCCGTGCGCTCCAGCTGCCGCCCCAGAAGGTCAATCTCCTTGTAGT 1640 Query 10260 CCCGGCC 10266 | | ||| Sbjct 1641 CGCCGCC 1647 >seq17740 Length=755 Score = 325 bits (360), Expect = 1e-84 Identities = 501/710 (71%), Gaps = 20/710 (3%) Strand=Plus/Minus Query 7881 ACGTTTTTGACGTTCCAGAACTCGTCCTTCGCGGCCACCTCGGACACCGGTAGCAGCTGG 7940 |||||||||| | | ||| |||||||| || || |||||||| ||||| | ||||| Sbjct 738 ACGTTTTTGATGGCCGCGAAGTCGTCCTTGGCCGCGACCTCGGAGACCGGAATCAGCTTT 679 Query 7941 ATCCCGTCCTTCTTGCCGTTAGGCGCGTACATGAACAGGTTGCGGAAATTGCCCGGCCCC 8000 | || || ||||||| || |||| || ||||||||||||||| |||||||| ||| Sbjct 678 AGGCCCTCGGCCTTGCCGCCCGGGGCGTGCAGGAACAGGTTGCGGAAGTTGCCCGGTCCC 619 Query 8001 TTGGCACTCTTCATCGCCTCGCGCAGCGTGTCGACATCCTCTTGCCTCTGCGCCGCGTCG 8060 ||||| | ||||| ||||||||| || | || | || | || | ||||| Sbjct 618 TTGGCCCCCTTCAGCGCCTCGCGTAGTGCATCCGCGTCGGCCGTGCTGACCTGGGCGTCC 559 Query 8061 GTCATGTACAGGATGAAACCGGCGTGGGAGCCGTTTTTGTAGTACCGGCGGCGGAACAGC 8120 | || ||| |||||||| |||||||| || ||||| ||||||| || ||||||| Sbjct 558 GACAGGTAGAGGATGAAGCCGGCGTGCGACCCGTTGGCGTAGTACTTCCGCCGGAACATG 499 Query 8121 GTGGCCGATTCGTTCAACCATGTGGCGTTCAACGCGGACAGGTATTCCGGCAGGCCGTAC 8180 ||||| | ||||| | ||| | | | || |||| | ||| || |||| ||||| Sbjct 498 GTGGCTGCCTCGTTGAGCCAGGCCGACTGCAGCGCGCTGATGTACTCGGGCAAACCGTAG 439 Query 8181 ACCTCCTGATTGATGTCCGGTTCCTGGAGGTGGAACACTGAGCCGGCGGCGAAGATGTAC 8240 | ||| ||||||| ||| || | |||||||||| |||||||| | || || | Sbjct 438 ATCTCTTGATTGACGTCATCCTCGCGAAGGTGGAACAGCGAGCCGGCTGGAAACTCGTGC 379 Query 8241 GGCTGCTGCCAGTTCTGCACGAAAAAATAGGTGTTCAGGTCGAGCCCGCGCCGCACGTAC 8300 |||| ||||| ||||||| ||||| | | | || ||||||| ||| |||| Sbjct 378 TCCTGCAGCCAGCCGCGCACGAAGAAATACCGGCCCGGCTCCTGCCCGCGGCGCGTGTAC 319 Query 8301 TTGGCCAGGG------GCGTATCGAGCCGGATTGTCCCGCCCAACACGTTTTCGCGGC-G 8353 |||||||| | || || ||| || | |||| || || |||||| | Sbjct 318 TTGGCCAGCGCGTGCTGCAGCTCCAGCGGG--CGCCCCG-TGAATGCG----CGCGGCTG 266 Query 8354 CTCCAGGTACGCATTGCCGAACACCTGCCAGTCCAGCACCAGGCGCTCGAAGGTCGCGCG 8413 ||| | ||| ||||||||||| || | |||||||| ||| | | | || ||||||| Sbjct 265 CTCGACGTAGGCATTGCCGAAAACGAGGAAGTCCAGCGCCATGGCCCCAAACGTCGCGCT 206 Query 8414 CGACAGCAGCGGATGCGGAATGAACGTCG---AGACCAGGATATTGCGCTTCACGTAGAC 8470 ||||||| ||||||| || | |||| ||| || |||| |||||||||| | ||| Sbjct 205 CGACAGCCGCGGATGGGGGACGAACATCGCCTTGAGCAGG---TTGCGCTTCAGGAAGAT 149 Query 8471 GGCCGAGCTGTGGTGCGCGGCGGCGCGGAACGAGCGCGCCAGGCCATCCCACGGCATGGG 8530 || |||| ||||||| | |||||||||| || ||||| ||||||||||||| || Sbjct 148 CGCAGAGCCATGGTGCGGCGACGCGCGGAACGCGCTCGCCAATCCATCCCACGGCAGCGG 89 Query 8531 CGGTTCATACCACTGGCCCATGCGCATGCACTCGACGTAATCCAGCAGCT 8580 ||| |||||||| | || || ||||| |||||||| |||||||||| Sbjct 88 CGGCTCATACCATCGACCGTTGAACATGCTTTCGACGTAGTCCAGCAGCT 39 >seq15326 Length=957 Score = 190 bits (210), Expect = 5e-44 Identities = 282/400 (71%), Gaps = 15/400 (4%) Strand=Plus/Plus Query 10759 ACCCCAAGGTCTACACCGCGCGCGTCAACCTGGAGCACATCCGCGGCTACGACCCGGCCG 10818 |||| | |||||| || ||||| ||| |||||||||||||||||||| |||| | Sbjct 3 ACCCGACCGTCTACGGAGCCCGCGTGAACATGGAGCACATCCGCGGCTACAGCCCGAGCA 62 Query 10819 GCCCGTTCAAGGCCTACGGCGACGTGACCGCGCTGAAGACCGAGGAACAGGA------CG 10872 || ||| || || ||||||||| ||| | |||||||| || || || Sbjct 63 GCGAATTCGGCGCGTATGGCGACGTGCTGGCGGTCAAGACCGAAGAGGTCGAGATCGGCG 122 Query 10873 GC------AAGCTCGGTTTGTTCGCGCAGATCGACCCCACGGACGATCTGGTCGCCATGA 10926 || ||||||| | | ||||||||| ||||| ||||| ||| |||| || | Sbjct 123 GCGCCAAGAAGCTCGCCCTCTATGCGCAGATCTCTCCCACCGACGAACTGATCGCGATCA 182 Query 10927 CCAAGGCCCGGCAGAAGATCTTTTCGTCCATGGAGCTGCAGCCGAGCTTTGCGGATACCG 10986 |||| || |||||||||| || | || ||| ||||| || || || |||| Sbjct 183 ACAAGAAGCGCCAGAAGATCTACAGCTCGCTCGAAGTGCGGCCGAAGTTCGCCGACACCG 242 Query 10987 GCGAGGCCTATCTGGTCGGCCTGGCCGTGACCGACAACCCGGCGAGCCTCGGGTGCGAAG 11046 | ||||||||||| ||||||||||||| ||||||||||| || |||||||| ||| Sbjct 243 ACAAGGCCTATCTGATCGGCCTGGCCGTCACCGACAACCCTGCCAGCCTCGGCACTGAAA 302 Query 11047 TCCTGCAGTTCAGCGC---CAAGGCCAAAACGAACCCGCTCGCCGCGCGCAAGCAGCACC 11103 | ||||||||| || ||| | ||| | |||||| |||||||||||||| | || | Sbjct 303 TGCTGCAGTTCGCGGCCAGCAATCCGAAAGCCAACCCGTTCGCCGCGCGCAAGGAACAGC 362 Query 11104 CGGACAACCTGTTCACCGAAGCCGTGGAGGTGTCGTTCGA 11143 | ||| | || |||| || || | |||| | ||| |||| Sbjct 363 CCGACGATCTCTTCAGCGTGGCGGAGGAGTTCTCGCTCGA 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127848409021384