Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11176 123 2e-23 seq18158 86.0 6e-12 >seq11176 Length=1573 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || ||||||| ||| || || |||| ||||||||||| |||||||| Sbjct 687 TCCTTCTGAATATTATAATCGGACAATGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAG 628 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||| || | |||| || |||||||| |||||| || | | || Sbjct 627 ATCAGTCGCTGCTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTGACATTT 568 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || | ||||| || | || || ||||||||||||||||| || ||| Sbjct 567 TCGATAGTATCAGAAGCCTCCACTTCGAGTGTTATGGTTTTACCCGTCAAAGTCTTTACA 508 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 507 AAAATCTGCATTC 495 >seq18158 Length=729 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 35595 TACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTT 35654 ||||||| || ||||| ||||||||||| | |||| | |||||||||| ||| ||| Sbjct 359 TACCCGCGAAGATCAATCGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATTTTTG 418 Query 35655 GCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 ||| | | | | | ||||| | |||||| || | ||||| |||||||| || | Sbjct 419 CCTTAACATTCTCGATGGTGTCAGATGCTTCCACTTCTAATGTGATTGTTTTACCGGTAA 478 Query 35715 AAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| || ||||| Sbjct 479 GAGTTTTAACAAAGATTTGCAT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450658570412040