Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq22412 113 2e-20 >seq22412 Length=546 Score = 113 bits (124), Expect = 2e-20 Identities = 228/330 (69%), Gaps = 10/330 (3%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCAC--CACGGACTGCGCCTGCT 36770 ||||||| || |||||||| ||||||| ||| || | | | ||| | || ||| Sbjct 502 TCGGCCCGGCCGGCACCGGCAAGACCTACCTCGCGGTGGCCTGCGCGGTCGATGC--GCT 445 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 ||| || | | ||||| |||| |||| ||||| || |||||||||| || Sbjct 444 CGAGCGCAGCGCGGTGCAGCGCATCGTGCTCACGCGCCCGGCGGTCGAGGCCGGCGAACG 385 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAG-AGAAGATGGCTCCGTACCTGATCCCGATGC 36889 ||| |||| ||||||||||| | | || | ||||| | | || |||||| ||| || Sbjct 384 GCTGGGCTTCCTGCCCGGCGACCT-GACGCAGAAGGTCGACCCCTACCTGCGGCCGCTGT 326 Query 36890 TGGACGCGGTGATCGACCTGGTTGGC-CCGACGATG-GCCAAGCGCCTGCAGGAGACCCG 36947 |||||| | ||||||| | ||| ||| | | || | |||| | ||| | Sbjct 325 ACGACGCGCTCTACGACCTGATGGGCTTCGAGAAGGTGCAGAAGGCCTTC--GAGCGCAA 268 Query 36948 CCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCT 37007 | ||| |||||||| |||||||||| |||||| || || || ||||| || | ||| | Sbjct 267 CGCGCTGGAGATCGCGCCGCTGGCCTTCATGCGCGGGCGCACGCTCAACAACGCCTTCGT 208 Query 37008 CATCGCCGACGAGATGCAGAACGCCACCCC 37037 ||| ||||||| ||||||| ||||||| Sbjct 207 GATCCTCGACGAGGCGCAGAACACCACCCC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180745352349594