Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq19355 150 4e-32 >seq19355 Length=665 Score = 150 bits (166), Expect = 4e-32 Identities = 405/612 (66%), Gaps = 13/612 (2%) Strand=Plus/Plus Query 6590 ATCCCCGAGGGCTACCGGATGGACGGGCAAAAGCGCCTGATCCCGGAGGCCACCATCAAG 6649 || ||||| |||||||| |||| | | || ||| | || ||||| |||||| Sbjct 48 ATTCCCGACGGCTACCGCGAGGACCGTAACGGTCGGCTGGTGCCCGAGGCACAGATCAAG 107 Query 6650 CCCGTTGACCTGGCCCGCGACCAGTTGGTTATGGAGCTGGTGG-GCAAGGCCAAGGCAGT 6708 || | || ||||| ||||||||| |||| |||| | | || | || |||| Sbjct 108 CCGATCGATCTGGCGCGCGACCAGCTGGTGCAGGAGAAGATCCAGCGCGCCCT--GCAG- 164 Query 6709 CCAGAGCGAG---CTGGCCCGCTTCAAGGCTTCCGCGTTCGGCGACATCGACGCTTTCGT 6765 | | |||| ||| | ||||||||| | |||||| ||||| | || ||||| Sbjct 165 -CTGCGCGAAGAACTGCGCACCTTCAAGGCGGACACGTTCGCTGACATTGCAGCCTTCGT 223 Query 6766 CGATCTGTCGGTCGAGCAGTACGGCACCAAGCTGGGAGGCAAGAAAGGGAACGTCTCCCT 6825 | || | ||||||||||||| |||| | || ||| | || || ||||| ||| Sbjct 224 GCAGCTCAGTGGCGAGCAGTACGGCGCCAAAATCGGCGGCGACAAGGGCAACGTGAGCCT 283 Query 6826 CCTGAGCTTCGATGGCCGCTACATGATCAAGAAAGCGATCCAGGAAACCATCCAGTTCGA 6885 | || ||| |||||||||| |||| | || |||||| | ||||| ||||| Sbjct 284 GTACACCTACGACGGCCGCTACAAGATCCTGCGCGCCTGCCAGGACAGTATCCAATTCGA 343 Query 6886 CGAGCGTATCCAGGCCGCCCGCGAGCTGATCGAGGAATGCCTTCGCGACTGGACCCAGGG 6945 |||||| | ||||| ||| | || ||||| || ||||| |||||||||| | || Sbjct 344 CGAGCGCCTGCAGGCGGCCAAGGCCCTCATCGATGAGTGCCTGAACGACTGGACCGAAGG 403 Query 6946 CGCCAGGCCCGAAGTGGTCACCCTGGTAACCAACGCTTTCCGCACTGACACGAAGGGCGA 7005 | || | ||||| || |||| |||| | | ||| ||| | | | | ||| Sbjct 404 CTCCCGAGCCGAACTGCGCACCTTGGTCAATAGCGCCTTCAAGGTGGGCCAGGACGGCAG 463 Query 7006 AATCCGTACCGCCCGAGTGCTCGCCCTGCGCCGCCTGGACATCCAAGACGAGCGCTGGCT 7065 ||| |||| | |||||| | |||| ||||| | || | || |||||||| Sbjct 464 CATCAAGACCGGCGAGGTGCTCTCGCTGCATCGCCTCAAGTTCGATGATCCGCGCTGGCA 523 Query 7066 GCGAGCCATGAATGCGATTGGCGACGC-CTGCCAGGCGGTGGGTTCCAAGGCCTACATCC 7124 || || ||||| || || ||||||| || | || |||||| |||| |||| | | Sbjct 524 GCAGGCGATGAAGGCCATCAGCGACGCGGTGAC-GGTGGTGGGCAGCAAGACCTATGTGC 582 Query 7125 GCGTCTATGAACGGGTCGGCGACAGCGACCAGTACCAGCAGATCAGCCTCGATATGGCGG 7184 | |||| || || || || | | ||||||||||| |||| |||||| |||||| Sbjct 583 GGTTCTACGAGCG---CGACGCGCGGGGCCAGTACCAGCCGATCTCCCTCGACGTGGCGG 639 Query 7185 GGGTGTGATATG 7196 |||| ||| ||| Sbjct 640 GGGTCTGACATG 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117649711995056