Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_027387.1 Length=38810 Score E Sequences producing significant alignments: (Bits) Value seq17604 221 3e-53 >seq17604 Length=764 Score = 221 bits (244), Expect = 3e-53 Identities = 125/127 (98%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 27721 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 27780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 GCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTA 176 Query 27781 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTTAAAGGAGGAACT 27840 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 175 GCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACT 116 Query 27841 ATATGCG 27847 |||| || Sbjct 115 ATATCCG 109 Score = 87.8 bits (96), Expect = 4e-13 Identities = 81/103 (79%), Gaps = 11/103 (11%) Strand=Plus/Minus Query 26497 CGCTAAATTAATACGACTCACTATAGG--------GAGACCACAACGGTTTCCCTCTAGG 26548 ||| ||||||||||||||||||||||| ||| | ||| || |||||||| Sbjct 763 CGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGA 704 Query 26549 AATAACTTTGTTTAACTTTCTTAAGAAGGAGACATACATATGG 26591 ||||| ||||||||||| |||||||||||| |||||||||| Sbjct 703 AATAATTTTGTTTAACT---TTAAGAAGGAGATATACATATGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124035094449432