Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_028695.2 Length=40491 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 6e-12 >seq5 Length=40538 Score = 84.2 bits (92), Expect = 6e-12 Identities = 125/176 (71%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 28876 TGGCCCCACAGGTCCTTCAGGCCGTTCGGCGCGGGCGTACCGGTCAGATTGATGAAGCGC 28935 || |||||||| |||| || ||||||||| | || ||||||||||| | ||||| ||| Sbjct 19242 TGCCCCCACAGATCCTGCAAGCCGTTCGGTGACGGTGTACCGGTCAGTTCAATGAATCGC 19183 Query 28936 TTAATCTTCTTGTGCGCCACCTTGCCGAGGGCCCGGGCGCGCTTGCTACCGCCTTTAC-- 28993 | | ||||| ||| || | || | || | || |||| |||| |||| | Sbjct 19182 CGCACCCTCTTGAACGCAACACTACCCAAAGCTTGCGCACGCT---TACCACCTTGCCGC 19126 Query 28994 -TACGGAACGACTTCAGCTTGGTCGATTCATCGGCAACGATGACAGTGAACGGCCA 29048 ||||| ||||||||||| || |||||||| ||||| | ||||||||||| Sbjct 19125 AGGCGGAATGACTTCAGCTTTGTGGATTCATCAGCAACCACTTTGGTGAACGGCCA 19070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129412763740918