Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq22412 120 1e-22 >seq22412 Length=546 Score = 120 bits (132), Expect = 1e-22 Identities = 295/437 (68%), Gaps = 14/437 (3%) Strand=Plus/Minus Query 5819 AGTACGACCTGACCGTCTCCACCGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCAT-- 5876 || ||||| | ||| || || |||||| || || || || ||||||| ||| || | Sbjct 523 AGCACGACATCACCTTCGGCATCGGCCCGGCCGGCACCGGCAAGACCTACCTCGCGGTGG 464 Query 5877 CCACCACGGCCTGCGCCTGCTGGAGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCC 5936 || | ||| | || ||| ||| | | | | | |||||| |||| |||| || || Sbjct 463 CCTGCGCGGTCGATGC--GCTCGAGCGCAGCGCGGTGCAGCGCATCGTGCTCACGCGCCC 406 Query 5937 CGCCGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACG-AGAAGATGG 5995 || || ||||| | || ||| ||||||||||||||| | |||| ||||| | | Sbjct 405 GGCGGTCGAGGCCGGCGAACGGCTGGGCTTCCTGCCCGGCGACCT-GACGCAGAAGGTCG 347 Query 5996 CACCCTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGG---CCCGACGATGA 6052 |||||||| ||| || |||||| | ||||||| | || | || | || Sbjct 346 ACCCCTACCTGCGGCCGCTGTACGACGCGCTCTACGACCTGATGGGCTTCGAGAAGGTGC 287 Query 6053 CGAAGCGCCTCCTCGAGTCGC-GCCAGCTGGAGGTCGCCCCGCTGGCCTACATGCGAGGC 6111 |||| |||| ||||| ||| | ||||||| |||| |||||||||| |||||| || Sbjct 286 AGAAG-GCCT--TCGAG-CGCAACGCGCTGGAGATCGCGCCGCTGGCCTTCATGCGCGGG 231 Query 6112 CGGACGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCACCCCGCGCCAG 6171 || ||| ||||| || | | | | || |||||| ||||||| ||||||| ||| Sbjct 230 CGCACGCTCAACAACGCCTTCGTGATCCTCGACGAGGCGCAGAACACCACCCCCGAGCAG 171 Query 6172 ACCGCGCTGCTGGTGACCCGCCTGGGCTTCGGGACGAAGGCCGTCCTGAACGGTGACCCG 6231 | | || | | || ||| | |||||||| | ||||| || ||| || ||| | Sbjct 170 ATGAAGATGTTCCTCACGCGCATCGGCTTCGGCGCCAAGGCGGTGGTGACGGGCGACGTG 111 Query 6232 GCCCAGTGCGACCTGCC 6248 |||| ||||||||| Sbjct 110 AGCCAGATCGACCTGCC 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191433510055040