Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq22613 116 1e-21 >seq22613 Length=539 Score = 116 bits (128), Expect = 1e-21 Identities = 214/312 (69%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 39035 TCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCGCA 39094 ||||||| |||||| ||| || | |||| | ||||| | ||| ||| || || Sbjct 92 TCGGCCGTGTAGTGGACCTTGAGCCAGCCCGTATGATAGGCCAGCAGCGAGTAGGCGGCG 151 Query 39095 GAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCTGG 39154 | ||||| |||||||||| |||| || ||||| | | || ||| | | | | | | Sbjct 152 GCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGATCTCGTCG 211 Query 39155 ATGGCGCTGTCC---GAGTAGCCTCGCTCGCGC---GCTCCCTTCTGGAAGTTCACGAAC 39208 || ||||| | | ||| || || | || ||| |||| ||| || Sbjct 212 ---GCCTTGTCCTGCGCGATGCCGTGCGTGCTCAGGGCGCCCGCGCGGAATTTCTCGCGG 268 Query 39209 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGG 39268 | || ||||| ||||| |||||||||||||||| || || |||||||||||||| | Sbjct 269 TGCTCGGCCATCTCCTCGAGCTTCTTCTTGCCCATCGCGCGGCGCAGCAGGTCGGCGCCG 328 Query 39269 CCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATG 39328 || || ||||| | ||||||||||| | || | ||||||||||||||||| ||| Sbjct 329 CCGAGCGAATAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCTCCTGGTAGACCATG 388 Query 39329 AGCCCGTACGTC 39340 | |||||| ||| Sbjct 389 ATCCCGTAGGTC 400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160360754654562