Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq22613 122 3e-23 >seq22613 Length=539 Score = 122 bits (134), Expect = 3e-23 Identities = 234/338 (69%), Gaps = 14/338 (4%) Strand=Plus/Plus Query 37942 TCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCA 38001 ||||||| |||||| ||| || | |||| | ||||| | || ||| || || Sbjct 92 TCGGCCGTGTAGTGGACCTTGAGCCAGCCCGTATGATAGGCCAGCAGCGAGTAGGCGGCG 151 Query 38002 GAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC-CG 38060 | ||||| |||||||||| |||| || ||||| | | || ||| | | | | || Sbjct 152 GCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAGGTCGAAGATCTCGTCG 211 Query 38061 GA-TGGCAGCCTCCGAGTAGCCTCGCTCGCTC---GCCCCCTTCTGGAAGTTCACGAACT 38116 | | | ||| || | ||| || |||| || ||| |||| ||| || | Sbjct 212 GCCTTGT--CCTGCGCGATGCCGTGCGTGCTCAGGGCGCCCGCGCGGAATTTCTCGCGGT 269 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 || ||||| | ||||| |||||||||||||||| ||||| || || |||||||| | Sbjct 270 GCTCGGCCATCTCCTCGAGCTTCTTCTTGCCCATCGCGCGGCGCAGCAGGTCGGCGCCGC 329 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 |||| | || ||| ||||||||||||| | || | ||||||||||||||||| |||| Sbjct 330 CGAGCGAATAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 389 Query 38237 GCCCGAAGGTCGGGTCC---AGGATCTCGGCCAGCGGC 38271 |||| ||||| ||| || |||| ||||| |||| Sbjct 390 TCCCGTAGGTC---TCCGAGAGCATCTGGGCCA-CGGC 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159669751342866