Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_028997.1 Length=59802 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 2e-13 >seq5 Length=40538 Score = 89.7 bits (98), Expect = 2e-13 Identities = 136/186 (73%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 25969 TTTAATAACGATACCATCCGTGTTAGCACTAACGAC-CTGAATACCGTTAAGCT-CCAGT 26026 ||||||||| || || || ||||| || ||| || |||| |||| || |||| ||||| Sbjct 15540 TTTAATAACAATGCCGTCGGTGTTTGCCGAAACAACACTGA-TACC-TTCAGCTTCCAGT 15483 Query 26027 GTCTCAATGAGCATAAGCAGAGCTAACTGTCCTGTCAGCGTAGTCTGGATGAT-AAGGTG 26085 ||||| | |||||||| | | ||| || || | ||| |||||||| | || || Sbjct 15482 CGTTCAATCAACATAAGCAATGACAGCTGCCCGGTGATCGTGGTCTGGATCAGCAACGTT 15423 Query 26086 CGGTGCATAAAGGATAGAGAACGGTGAACCGAACTTACCATAAGAACCGTTGATAACGAT 26145 || | ||| || || || | ||||||||||||||||| | ||||||||||| ||| Sbjct 15422 GGG-GAATACAGAATTGAATAGGGTGAACCGAACTTACCGAATGAACCGTTGATCGTGAT 15364 Query 26146 CTTAAG 26151 ||| || Sbjct 15363 CTTCAG 15358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191190379260184