Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_029021.1 Length=60747 Score E Sequences producing significant alignments: (Bits) Value seq5 107 7e-19 >seq5 Length=40538 Score = 107 bits (118), Expect = 7e-19 Identities = 140/186 (75%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 26680 TTTAATAACAATACCGTCCGTGTTAGCACTGACGAC-CTGAATACCGTTAAGCT-CCAGT 26737 |||||||||||| ||||| ||||| || || || |||| |||| || |||| ||||| Sbjct 15540 TTTAATAACAATGCCGTCGGTGTTTGCCGAAACAACACTGA-TACC-TTCAGCTTCCAGT 15483 Query 26738 GTTTCAATGAGCATAAGCAAAGCCAACTGGCCTGTCAATGTGGTCTGAATAAT-AAGGTG 26796 |||||| | ||||||||| | || ||| || || | |||||||| || | || || Sbjct 15482 CGTTCAATCAACATAAGCAATGACAGCTGCCCGGTGATCGTGGTCTGGATCAGCAACGTT 15423 Query 26797 CGGTGCATACAGAATAGAGAACGGTGAACCGAACTTACCATAAGAACCGTTAATAACGAT 26856 || | ||||||||| || | ||||||||||||||||| | |||||||| || ||| Sbjct 15422 GGG-GAATACAGAATTGAATAGGGTGAACCGAACTTACCGAATGAACCGTTGATCGTGAT 15364 Query 26857 CTTAAG 26862 ||| || Sbjct 15363 CTTCAG 15358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194213518748854