Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_029097.1 Length=44496 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 3e-15 >seq5 Length=40538 Score = 95.1 bits (104), Expect = 3e-15 Identities = 233/347 (67%), Gaps = 10/347 (3%) Strand=Plus/Minus Query 24092 GCTTGACTGCAATGTAATTGTTAATGTCGCGGGAATAAACCGCAAGATACCGGGTTTCTT 24151 |||||| |||||||||||||| | |||||||||||| | ||| ||||| || ||| Sbjct 15673 GCTTGATCGCAATGTAATTGTTCACGTCGCGGGAATACAACGCCAGATATTCTGTCGCTT 15614 Query 24152 CCGTAACGAACTTCGTTTCGGCTTCAAATTCTTTAATCAGCGCGTCGCGAAGCGCGATTT 24211 | || | || || ||| ||| |||| | | | | || ||| || | Sbjct 15613 CAGTCTCAAAGCCGGTGTCGTGTTCCCATTCCATCGTGATGACTTCCATCGGCGTGACCT 15554 Query 24212 GATCTTTACGCGCTTTAACAACAACGCCGTCGGTATTGGCCGAAATAACGGGAATGCCGT 24271 ||| | ||||| ||||| ||||||||| || ||||||| ||| || || | Sbjct 15553 TATCGCGGGGGCATTTAATAACAATGCCGTCGGTGTTTGCCGAAACAACACTGATACC-T 15495 Query 24272 TCAT-TTCGAACTTTTCGATAAACATTAGAAGCGTCAATTGCCCGCTAATTGTCGTTTGC 24330 ||| ||| | ||| || ||||| || | | || |||||| | || || || || Sbjct 15494 TCAGCTTCCAGTCGTTCAATCAACATAAGCAATGACAGCTGCCCGGTGATCGTGGTCTGG 15435 Query 24331 AACAGCAA-GTCGGGCGCGTAAAGAATTGAATACTTCGACCCCAACTTGCCGAAGCTTCC 24389 | |||||| || ||| | || ||||||||||| || || ||||| ||||| || Sbjct 15434 ATCAGCAACGTTGGG-GAATACAGAATTGAATAGGGTGAACCGAACTTACCGAATGAACC 15376 Query 24390 GTTGATTGTGATTTTCAG---ACTGTCGGCGGTAATCTTGTCGCCGC 24433 |||||| ||||| ||||| |||||| | | | ||||||||||| Sbjct 15375 GTTGATCGTGATCTTCAGCGAACTGTCTG---TCACCTTGTCGCCGC 15332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142225116811948