Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq9234 145 2e-30 >seq9234 Length=2011 Score = 145 bits (160), Expect = 2e-30 Identities = 748/1176 (64%), Gaps = 73/1176 (6%) Strand=Plus/Plus Query 12020 ggCCGCTGGCCGTGGTGCCGCGCTTGATCGACAGGAACGCCGCCGCGACCTCGGTCCAAC 12079 |||||||||| ||| |||||||||| | || ||| ||||| |||| |||||||| | Sbjct 258 GGCCGCTGGCGGTGAGCACGCGCTTGATGGCCATGAAGGCCGCGGCGATGTCGGTCCATC 317 Query 12080 CGGCATCCCATTCGATGCGCTTGCCCT---GGATCACGTCCTGGGCCTTGAGCACCAGGG 12136 | ||||| | || | ||| |||| |||| || | || ||||| ||||||||| Sbjct 318 CAGCATCGAACTCCAGTCGC---CCCTTGTGGATGACCTGTTGCGCCTTCAGCACCAGGC 374 Query 12137 CGTTCTTCGCCTCCAGGCTGTAGTGAATCGGAGTAGCCC-------GGGGGAAGAAGTCT 12189 | |||| |||| | |||||| || ||||||| |||| ||||| | Sbjct 375 GCTGCTTCACCTCGATGCTGTACTG-------GTAGCCCTTCACCTGGGGAAAGAACTTC 427 Query 12190 TTCACCAGGTCGAACACCCCGTAACCGACGCCGGTAATGTCGATGCCGATGTGCTGGACG 12249 | || | | |||||| || ||| | |||||| ||||||||||||| ||| |||| Sbjct 428 TCGACGATCTGGAACACGCCAGCACCCAGGCCGGTCTTGTCGATGCCGATATGCACGACG 487 Query 12250 TTGAAGCGCTCGCACAGCTTCTCGATCTGCTTTGCCTGATGCGTGAACGACGTCC---CC 12306 ||| | ||| | | | ||| || ||||| || | ||| |||| || Sbjct 488 TTGTATTGCTGGGTGATCCGACGGATGGCCTCGGCCTG-CGCCT---CGAAGTCCGAGCC 543 Query 12307 CGCCAGCTG-TGCTTCTCCAGGATTCGGAACTTGCCGCCCGGCTCCAGGGGCGGGGCAAC 12365 | | ||| | | ||||| |||||||||||||| ||| | | ||||| || || Sbjct 544 CTTGAACTGCTCGCGATGTAGGATGCGGAACTTGCCGCCTGGCACGCGCGGCGGCGCGAC 603 Query 12366 GACAACGCACGTCGCGTCGTCGCGGGTTCGACTG--GGGTCATACCCGAGCCAGACCGGG 12423 || || | ||| | |||| | | ||| ||||| || |||| ||| ||||| Sbjct 604 CACCACCAGTGCAGCGGCATCGC--CCTTGTCTGATGGGTCGTAGCCGACCCACACCGGA 661 Query 12424 CGGTTGTCGAACGGCCGCGGGCTGTCCGGGTCGTAGTCGGTCCATA-GGCCCA--AGTCG 12480 || || | ||||| | ||| | | |||| |||| | |||| |||| Sbjct 662 AAGTGAGCGTAGGGCCGAATCCAAAGCGGCTTGACGTCGCTCCACATCTCCCAGCTGTCG 721 Query 12481 GAATAGCAGCGCTCCAGGTCGGCCAAGGCGAATGCAGC--CTGGGTGCTGTCGATGAACT 12538 ||| || || | |||| | ||| |||| | | || ||||||||||| Sbjct 722 ATCATGCAAGCCTGCATCTGCGCCAGCGTGAA--CAGCGACAAGCTGTCGTCGATGAACT 779 Query 12539 TGCACATGAACAGCTGTTCGAAGCGCTCTTC---GTCGTACTCCAGCTGCAGGCGCTCCA 12595 |||||||||||| ||||| | ||| || | ||| ||| |||| | | Sbjct 780 GGCACATGAACAG--GTTCG-CGAACTCGTCGAGGCTGTATTCCTCGCGCAGCTCGGCGA 836 Query 12596 GGTCGAACAGGTTGCAGCCGCCGGCGATGGCGTCTTGAATCGTGATGACCTTGCGCCACT 12655 |||||||| | | |||| |||| |||||||| | ||||| || | |||||| | Sbjct 837 TATCGAACAGATCGAAGCCCATCGCGACGGCGTCTTCCACCGTGACGATGTCGCGCCATT 896 Query 12656 GCCCGTCCGGGCACAACGCGCCGGCGTGGATCTGCGCTTCGCTGG----GCCACGGCC-- 12709 | || ||| || | |||| || | | | | | ||||| | ||| | Sbjct 897 TGCGATCGAGGCCCAGCATGCCGCCGCGCAGCATCTTGTGGCTGGTGTCGATGCGGACGT 956 Query 12710 CGGCCTTCTTTCCGCGCTTGCTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCT 12769 | |||| || |||| |||| ||| || |||||||||||| || | |||| Sbjct 957 GGTCCTTTTTCGCGCGGCCCTTGTTCCGG---TCGTCGCCGGTCCAGAACCCGAAGGCCT 1013 Query 12770 GGTGCGTTACCGCGCTGGGCGTGGAGAAGTAGGTCAGGCGCCACT--TTGCATGCGAGGC 12827 ||||| | ||| |||||| ||||| |||||| |||||| | ||| ||||| || Sbjct 1014 CGTGCGACATCGCCGAGGGCGTCGAGAAATAGGTCTTGCGCCAGTGCTTG--TGCGAAGC 1071 Query 12828 CATCGCGCTGGCCACCGTCTGCAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGAT 12887 |||||| ||||||| | | | | || | ||| |||| ||| || | ||| |||| Sbjct 1072 CATCGCACTGGCCAGCTTGTTGATCTGCCTGAAGCGTGGGACCCAAAAAAATTCATCGAA 1131 Query 12888 GTAGACGTGGCCGTGGTAGCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTC 12947 ||||| || |||||| |||||||| ||||| || ||| || || || ||| || Sbjct 1132 GTAGAAGTCGCCGTGATAGCTCTGGGCCGTCATGGCGTTGGTGCCAAGGAAGATCAGCTC 1191 Query 12948 CGCCCACGGCTTGCCGTCTTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAA 13007 || |||| || | || ||||| | ||| ||| |||| |||| Sbjct 1192 GGC---------GCCG---TTCCACAGCTTGATGTTCTCGCCCTTCAGGTCGACGTCGAC 1239 Query 13008 CCATTGCGCGGCGAAGGCGACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCTCGC 13067 | || | |||||| |||||||||||||||||||| | || ||| || ||| Sbjct 1240 CTCTTTC---GCGAAGTCGACGATGTAGCTGCGGAACTGGTGGGCCTGCGCCTTCGACGC 1296 Query 13068 GGACAGGAAAATCTGGTTGTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAA 13127 |||| ||||| || |||| ||| | | || | | ||| ||| | || Sbjct 1297 CGACAAGAAAAGCTTGTTGCGCCCCTCTTTCGCGGCCGAGAGCAGCGCCTCGCGCGAAAA 1356 Query 13128 GTAGTAGGTCAGCCCGATCTGGCGCGACTTCAGGAT 13163 ||| |||||| |||||||| |||| |||||||| Sbjct 1357 GTAATAGGTCGCACCGATCTGCCGCGCTTTCAGGAT 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104287115546194