Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_031114.1 Length=39235 Score E Sequences producing significant alignments: (Bits) Value seq17604 147 5e-31 >seq17604 Length=764 Score = 147 bits (162), Expect = 5e-31 Identities = 87/91 (96%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 23322 GCTGCTGCCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGG 23381 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 GCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGG 140 Query 23382 GGTTTTTTGCTTAAAGGAGGAACTATATGCG 23412 ||||||||||| |||||||||||||||| || Sbjct 139 GGTTTTTTGCTGAAAGGAGGAACTATATCCG 109 Score = 84.2 bits (92), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 13/102 (13%) Strand=Plus/Minus Query 22081 GAAATTAATACGACTCACTATAGG--------GAGACCACAACGGTTTCCCTCTAGAAAT 22132 |||||||||||||||||||||||| ||| | ||| || |||||||||||| Sbjct 760 GAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAAT 701 Query 22133 CATTCTTTGTTTAACTTTCTTAAGAAGGAGACATACATATGG 22174 || ||||||||||| |||||||||||| |||||||||| Sbjct 700 AAT--TTTGTTTAACT---TTAAGAAGGAGATATACATATGG 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125394707446982