Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8564 104 3e-17 >seq8564 Length=72546 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 || || || | | || ||||||| ||||| | || ||||||||||| ||||| |||||| Sbjct 47596 TTCATCTCTCGCGTTCTGGCCTTTTTTGCGGCTTCGGATGGAATCGTTAACGAGAATCTG 47537 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAA 125249 | || ||| | || ||| |||| |||| ||| || || ||||||||| Sbjct 47536 ATCGAGCGTTTCAATGCCGAAGTGAAACTTCCTGAGGCTAGGTGTTTCTATGGATTCCAA 47477 Query 125250 ATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || ||||| |||||| | |||||||| |||||||||| |||||||| Sbjct 47476 ATTATGATGGAGAACATTCACTCGGAGATGTACTCTATTCTGATTGA 47430 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| || ||||||| ||| || | ||||| | || ||| Sbjct 47316 AAGAAGGCCGATTGGGCTATGAAGTGGATCTCTGATGAGAGATCTTCTTTCGGAACAAGA 47257 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || || || || || |||||||| ||||| ||||| |||||||| |||||||| Sbjct 47256 CTGGTCGCTTTTGCTGCTGTGGAGGGCATATTCTTCTCGGGCAGTTTTGCTTCCATCTTT 47197 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||| | ||| || || | ||||| |||||| | || || || ||||| || ||| | Sbjct 47196 TGGTTGAAGTCTCGTGGTTTAATGCCTGGACTGGCTCAGAGCAATGAGTTGATCTCTAGG 47137 Query 125547 GACGAGG 125553 || |||| Sbjct 47136 GATGAGG 47130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740962565880320