Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9793 116 4e-21 seq10254 86.0 6e-12 >seq9793 Length=2388 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | |||||||| | ||||| | || | ||| | | | Sbjct 1635 ATGCAGATCTTCGTGAAGACCCTGACTGGAAAGACCATCACTCTTGAGGTTGAAGCCAGC 1576 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | ||||| |||||| ||||| ||||| || || || || ||| Sbjct 1575 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATCCCACCAGACCAA 1516 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | || ||| |||||||||||||||| | | | |||||| ||| Sbjct 1515 CAGAGATTGATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTTCCGACTACAAC 1456 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || |||||||| ||||| |||| |||| | |||||||||| Sbjct 1455 ATCCAGAAGGAATCTACACTCCATTTGGTGTTGAGGTTGAGAGGAGGAA 1407 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || ||||| || |||||||| | ||||| | ||| | ||| | Sbjct 1408 AATGCAAATCTTCGTGAAAACGTTGACTGGAAAGACAATCACATTGGAAGTCGAAGCTTC 1349 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| |||||| | || || |||||| ||||||||||| || || || ||||| Sbjct 1348 GGACACGATCGAGAACGTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCCCCAGATCA 1289 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||| | || | || ||| ||||| | ||||||| | | | || ||||| || Sbjct 1288 GCAAAGATTGATCTTCGCCGGAAAACAGTTGGAAGATGGGCGCACCCTCTCGGACTACAA 1229 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||| || || || |||| ||||||| Sbjct 1228 CATCCAAAAGGAGTCCACCCTCCACTTGGTCCT 1196 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | ||||| | || | || | | Sbjct 2153 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTTGAGGTCGAGGCGTCC 2094 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 2093 GACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAG 2034 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||| |||||| | ||||||| |||| | | || |||||| Sbjct 2033 CAACGTCTCATCTTTGCCGGAAAACAATTGGAAGATGGAAGAACCCTTTCTGATTATAAC 1974 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || ||||| ||| ||||| |||| || | | ||||| |||| Sbjct 1973 ATCCAGAAGGAATCCACTCTCCATTTGGTGCTCCGGTTGAGAGGTGGAA 1925 >seq10254 Length=5829 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | || || || || || || || || | |||||| | || | || | Sbjct 5046 AAGATGCAAATTTTCGTCAAGACTTTGACCGGCAAGACCATCACCTTGGAGGTGGAGGGA 5105 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | ||||||||||||| | || ||| ||||| ||||| || || || || || || Sbjct 5106 AGCGACACCATCGAGAATGTGAAAGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGAC 5165 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || ||| | || || | || || || ||||| || |||| | | | | | |||||| Sbjct 5166 CAGCAACGTCTGATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACCCTGTCCGACTAC 5225 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| ||||| || || || |||| ||||||| | ||| | || |||| Sbjct 5226 AACATCCAAAAGGAGTCCACCCTCCACTTGGTCCTCCGTCTTCGTGGTGGAA 5277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478599982423040