Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9793 136 3e-27 >seq9793 Length=2388 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | |||||||| | || || | || || || |||| | Sbjct 1635 ATGCAGATCTTCGTGAAGACCCTGACTGGAAAGACCATCACTCTTGAGGTTGAAGCCAGC 1576 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| |||||| | ||||| |||||| ||||| ||||| || || || || ||| Sbjct 1575 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATCCCACCAGACCAA 1516 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | || ||| || ||||||||||||| | | | | ||| || ||| Sbjct 1515 CAGAGATTGATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTTCCGACTACAAC 1456 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || ||||||||| | ||||| ||||| || |||||||||||| Sbjct 1455 ATCCAGAAGGAATCTACACTCCATTTGGTGTTGAGGTTGAGAGGAGGA 1408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| || |||||||| | || || | |||||||| || Sbjct 1408 AATGCAAATCTTCGTGAAAACGTTGACTGGAAAGACAATCACATTGGAAGTCGAAGCTTC 1349 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| |||||| | || || |||||| ||||||||||| || || || ||||| Sbjct 1348 GGACACGATCGAGAACGTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCCCCAGATCA 1289 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || ||| |||| | || ||| || || | ||||||| | | | || || || || Sbjct 1288 GCAAAGATTGATCTTCGCCGGAAAACAGTTGGAAGATGGGCGCACCCTCTCGGACTACAA 1229 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| ||||| || || || Sbjct 1228 CATCCAAAAGGAGTCCAC 1211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || || | || |||||||| | Sbjct 2153 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTTGAGGTCGAGGCGTCC 2094 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 2093 GACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAG 2034 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||| || ||| | ||||||| |||| | | ||||||||| Sbjct 2033 CAACGTCTCATCTTTGCCGGAAAACAATTGGAAGATGGAAGAACCCTTTCTGATTATAAC 1974 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || ||||| || | ||||| ||| | | |||||||| ||| Sbjct 1973 ATCCAGAAGGAATCCACTCTCCATTTGGTGCTCCGGTTGAGAGGTGGA 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429881337936960