Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9793 100 2e-16 >seq9793 Length=2388 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114240 TTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTT 114299 |||||||| |||| | |||||| || || || ||||||||||| ||||| ||||| Sbjct 1783 TTACCAGCAAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 1842 Query 114300 TGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTC 114359 || | | ||| | ||||||| ||| |||||| |||| ||| | || ||||| || Sbjct 1843 GCCTTGACATTTTCGATGGTGTCGCTGGCTTCGACCTCCAAGGTGATGGTCTTGCCAGTG 1902 Query 114360 AGAGTTTTTACAAAAATCTGCAT 114382 |||||||| || ||||||||||| Sbjct 1903 AGAGTTTTGACGAAAATCTGCAT 1925 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || | ||| | || || || || || |||||||| || Sbjct 952 ACCACCACGAAGACGGAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1011 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || ||||||||||||||| || ||| |||||||||| || ||||| || || Sbjct 1012 GAGAGTGCGGCCATCTTCAAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGG 1071 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| || | | || | ||| || | | ||||| Sbjct 1072 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCAGAAGCCTCGAC 1131 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || ||||| || || || || || || |||||||| Sbjct 1132 CTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420080984112384