Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8142 104 4e-17 >seq8142 Length=52432 Score = 104 bits (114), Expect = 4e-17 Identities = 169/242 (70%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGC 244398 ||||||||||||| |||||| || || ||||| || || | || ||||| Sbjct 5546 GCCCTCGTAGGTCTCGTAGGGTCCAAACTCCTTGGCCAACTCGCATGAGGCCTCCAGGGC 5605 Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAA 244458 || | ||||||||||||||||||| |||| | | ||||||| ||| |||||| Sbjct 5606 CGCATGGTAGATGGTCTCGAAGATCTGAATGTTGAGGAGCTTGGCCTTGTCGCTGGTGAA 5665 Query 244459 GGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCT 244518 || | | ||||| ||| ||| |||||||||| ||||| || ||||| |||||||| | Sbjct 5666 CGGCAGTCTCATCAGCATAAAGGCGTCGGCCAGACCCTGGACTCCGATTCCGATGGGACG 5725 Query 244519 GTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 || || ||||| |||| ||||| | |||||| | ||| | || ||||| Sbjct 5726 ATGGCGGAGATTGGACTTGCGCGCCTCTTCG---ATGGGGTAGTAATTGACATCAATCAC 5782 Query 244576 CT 244577 || Sbjct 5783 CT 5784 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 244656 TGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCG 244715 |||| |||||||| ||| | |||| | |||| |||||| || || ||||| |||| Sbjct 6292 TGATGATCACAAACCGGTTCAACGCGATGGATGCCAAGTTGCACACCGCGACCTCGTCCG 6351 Query 244716 AGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCT 244775 || ||| | || ||||| ||||| | ||| ||||||||||||||||| | | Sbjct 6352 GCGAGGAGTATTCGATGATCTCCGTGCACAAGTTGGAGCACTTGATGGTGCCCAAATTTT 6411 Query 244776 GGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 | ||||| ||||| |||||| |||||||||| ||| Sbjct 6412 GCTGATTCGACTTTCGGTTGCAATGATCCTTGTAGACCAT 6451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944216058168320