Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4549 100 3e-16 seq8142 96.9 4e-15 >seq4549 Length=14857 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 10961 CCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCA 11020 ||||| || |||||||| |||||||| | ||| || || || | ||||| | || Sbjct 13819 CCGACCGCATCAATTTCGTCGATGAACAAGATGCATGGGGAGTTCTTTCGGGCCATGGCA 13760 Query 11021 AAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCG 11080 || ||||| |||||||| || || ||||| ||||||||||| | || | | || Sbjct 13759 AACATATCACGGACTCTTGCGGGGCCAACACCAACAAACATTTCGAGGAATTCTGATCCG 13700 Query 11081 GA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11139 || ||| | |||||||||||| |||| ||| || ||| | ||| ||| || |||||||| Sbjct 13699 GAGACAGT-GATGAAGGGGACATTGGCTTCTCCGGCGGTTGCTTTGGCCAGAAGGGTCTT 13641 Query 11140 CCCCGTCCCAGG 11151 || || || || Sbjct 13640 ACCAGTACCTGG 13629 >seq8142 Length=52432 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 || || | || || |||||||| | |||||| || || || || || ||||| ||| Sbjct 7165 TTCGCACGGATATTATGGATGTTGAGACCAATTCCGCCGGCGCATTTCGAGATCATAGCG 7224 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 ||| | |||| || |||||| || ||||| || || | | | | ||||||| Sbjct 7225 CACCTCTTGAGCGTGGTGTAGATTCCATCGATGGAATCGTCGGCCATGGTCAGAAGGAAG 7284 Query 115163 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 ||||| |||| || || |||| ||||| || ||||||||||| || || |||||| | Sbjct 7285 CAGCTAGACAGCTGGGGAATTGGAGTACCGGCATTGAAGAGGGTGGGAGTGGCGTGGGTA 7344 Query 115223 AACATACCTTGGGACATCTTATCGTAGGTCT 115253 ||| || | ||||||| | |||||||| Sbjct 7345 AACCAACGCTCGGACATCAAGTTGTAGGTCT 7375 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || ||||| | | ||| ||| | ||| || || || ||| Sbjct 6315 GCGATGGATGCCAAGTTGCACACCGCGACCTCGTCCGGCGAGGAGTATTCGATGATCTCC 6374 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || | ||| ||||||||||| || | ||||| |||||| ||| || Sbjct 6375 GTGCACAAGTTGGAGCACTTGATGGTGCCCAAATTTTGCTGATTCGACTTTCGGTTGCAA 6434 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||| | ||| || ||| || || || ||||||||||| || || | | Sbjct 6435 TGATCCTTGTAGACCATATAAGGCAATCCAGTTTCGCATTGGGACTTGATGATTGCTTGC 6494 Query 114650 CAGACATC 114657 |||| ||| Sbjct 6495 CAGAGATC 6502 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 114794 ACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT 114853 ||||||||||| || | ||| |||| ||| ||||| | ||| ||||| ||||| | Sbjct 6732 ACACGCTTCATAAAAATGTCGGGGACCCAAAGAGCAGTGAACAGATCGCGACATCTTCGG 6791 Query 114854 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 114913 ||||| || ||||||||| | || |||| || | ||||||||||||||| || Sbjct 6792 TCTTCCGGGCCTACATTGAGACGGAGTTCGCAAAAATCAAAGATATCCGCGTGCCATGGC 6851 Query 114914 TCCAGGTACACCGCGA 114929 |||||||| | |||| Sbjct 6852 TCCAGGTATATGGCGA 6867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597275705090560