Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9793 113 5e-20 seq6028 93.3 5e-14 seq4534 93.3 5e-14 seq6751 89.7 6e-13 seq9670 87.8 2e-12 seq8467 87.8 2e-12 seq8986 86.0 7e-12 seq10307 84.2 2e-11 seq8985 84.2 2e-11 seq5970 84.2 2e-11 seq4529 84.2 2e-11 seq4482 84.2 2e-11 >seq9793 Length=2388 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| || | |||||||||||| | ||| ||||| || || ||||| || | Sbjct 1409 CCTCCTCTCAACCTCAACACCAAATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAA 1468 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || || || || || ||||| || | || ||| ||||| | ||| Sbjct 1469 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGG 1528 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||| ||| ||| |||| || | | ||||||||| | ||| || Sbjct 1529 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCGCTGGCTTCAACC 1588 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || || || || ||||| || ||||| ||||| Sbjct 1589 TCAAGAGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATCTGCAT 1635 >seq6028 Length=73961 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| |||||||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 59881 AAAAGTTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 59822 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 59821 TTACCACTATACTACCGAGGA 59801 >seq4534 Length=35417 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||||| |||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 22333 AAAAATTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 22274 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 22273 TTACCACTATACTACCGAGGA 22253 >seq6751 Length=7500 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| ||||||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 4147 AAAAATGTTTTCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 4206 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 4207 ACTTACCACTATACTACCGAGGA 4229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| || |||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 678 AAAAATGTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 619 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 618 ACTTACCACTATACTACCGAGGA 596 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| || |||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 1677 AAAAATGTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 1736 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 1737 ACTTACCACTATACTACCGAGGA 1759 >seq9670 Length=29525 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| || |||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 4946 AAAAACTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 4887 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 4886 TTACCACTATACTACCGAGGA 4866 >seq8467 Length=51838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| |||| |||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 9539 AAAGATTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 9480 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 9479 TTACCACTATACTACCGAGGA 9459 >seq8986 Length=6065 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 56982 CAAATTAACGTTTATGAAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCG 57039 || || || ||| | |||||| || |||| |||| | |||||||||| |||||| | Sbjct 2933 CACATAAAAGTTCACAAAAAATGTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCA 2874 Query 57040 CGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||||| ||||| ||||||||||||||||||| Sbjct 2873 CGTGACAGGCGCGGATACTTACCACTATACTACCGAGGA 2835 >seq10307 Length=3621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAA--TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 ||||| ||| |||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 1103 AAAAACGTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 1162 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 1163 ACTTACCACTATACTACCGAGGA 1185 >seq8985 Length=4986 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 ||| |||| |||| | |||||||||| |||||| | ||||||||||| ||||| ||| Sbjct 3546 TTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTTACC 3487 Query 57063 ACTATACTACCGAGGA 57078 |||||||||||||||| Sbjct 3486 ACTATACTACCGAGGA 3471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 4748 AAAAACTACCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 4689 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 4688 TTACCACTATACTACCGAGGA 4668 >seq5970 Length=5528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 56998 AAAAA--TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 ||||| ||| |||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 4177 AAAAACGTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 4118 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 4117 ACTTACCACTATACTACCGAGGA 4095 >seq4529 Length=23528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| || |||| |||| | |||||||||| |||||| | ||||||||||| |||| Sbjct 7316 AAAACGTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATAC 7257 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 7256 TTACCACTATACTACCGAGGA 7236 >seq4482 Length=132840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||| |||| |||| |||| | |||||||||| |||||| | ||||||||||| || Sbjct 120864 AAAAGTTTTTCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGAT 120923 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 120924 ACTTACCACTATACTACCGAGGA 120946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543141965050880