Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8142 123 4e-23 >seq8142 Length=52432 Score = 123 bits (136), Expect = 4e-23 Identities = 293/439 (67%), Gaps = 8/439 (2%) Strand=Plus/Plus Query 204163 GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCG 204222 ||||| || || |||| || |||||| || ||| || || || ||| | || Sbjct 5282 GATCAAATCACGGACCAAATGTTGGTTGACGACCTGGAAATCGCCCTTGGTCACTCTTCT 5341 Query 204223 GGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGT 204282 ||| ||| |||| |||| | ||||| || |||||||| ||||| | ||||| || || Sbjct 5342 CGTGTACATGTTGGAGGTGTAGGGTTCAAAGGCCTCGTTATTGCCCAGGATCTGGGCAGT 5401 Query 204283 GCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCT 204342 | ||| |||||||| ||||| | ||| ||||| ||||| ||| ||||| |||| | Sbjct 5402 GGAGGCGGTGGGCATCGGAGCGACGAGGAGGGAATTGCGGCAACCATATTTGGCGACCTT 5461 Query 204343 GCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTG 204402 | | | || || |||||| | | ||||||| || ||||| | |||| || Sbjct 5462 GGCCCTGAGGGAATCCCAGTCCCAGAGATCTGTGGGTTTTACACCCCAGAGGTCGGGTTG 5521 Query 204403 AAAGATGCCTT--GACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCT 204460 || ||||| ||| | ||| ||||| ||| ||| || || | ||| | Sbjct 5522 AAGCTGGCCTTTGGAC--ATTGGAGAGCCCTCGTAGGTCTCGTAGGGTCCAAACTCCTTG 5579 Query 204461 GCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTT 204520 |||| || ||| ||||| ||| ||| || ||| |||||||| |||||||||| ||| Sbjct 5580 GCCAACTCGCATGAGGCCTCCAGGGCCGCATGGTAGATGGTCTCGAAGATCTGAATGTTG 5639 Query 204521 A--ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCA 204578 | | || | |||| | | |||| ||| | || || ||| |||| |||| Sbjct 5640 AGGAGCTTG--GCCTTGTCGCTGGTGAACGGCAGTCTCATCAGCATAAAGGCGTCGGCCA 5697 Query 204579 AGCCCTGCACTCCGATTCC 204597 ||||| ||||||||||| Sbjct 5698 GACCCTGGACTCCGATTCC 5716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795051511761920