Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9793 143 3e-29 seq10254 118 1e-21 >seq9793 Length=2388 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | |||||||| ||| | |||| ||||| ||||| ||||||||||| Sbjct 1409 CCTCCTCTCAACCTCAACACCAAATGGAGTGTAGATTCCTTCTGGATGTTGTAGTCGGAA 1468 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || ||||| || || |||||||| ||||| | ||| ||||| | || Sbjct 1469 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGTGGG 1528 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||| |||||| ||||| || | | ||||||||| | ||| || Sbjct 1529 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCGCTGGCTTCAACC 1588 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || || ||||| || || || ||||| ||||| Sbjct 1589 TCAAGAGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATCTGCAT 1635 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| || || |||||| | || || | ||| || |||||||| Sbjct 1216 CTCCTTTTGGATGTTGTAGTCCGAGAGGGTGCGCCCATCTTCCAACTGTTTTCCGGCGAA 1275 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||| || | || | | || |||||| ||||| ||| | | Sbjct 1276 GATCAATCTTTGCTGATCTGGGGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTCACGTT 1335 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| | ||| || |||| ||||| || || || |||| |||||| || Sbjct 1336 CTCGATCGTGTCCGAAGCTTCGACTTCCAATGTGATTGTCTTTCCAGTCAACGTTTTCAC 1395 Query 46582 AAAGATTTGCATT 46594 |||||||||||| Sbjct 1396 GAAGATTTGCATT 1408 >seq10254 Length=5829 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||||||||| || ||||| | || || || ||||| || ||||| Sbjct 5240 CTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCCAGTTGCTTTCCAGCGAA 5181 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || |||||||| | || | || ||||||||| |||||| || | | Sbjct 5180 GATCAGACGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCTTTCACATT 5121 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| ||||| |||| |||||||| ||||| |||| || || || Sbjct 5120 CTCGATGGTGTCGCTTCCCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAAAGTCTTGAC 5061 Query 46582 AAAGATTTGCATTTT 46596 || |||||||| || Sbjct 5060 GAAAATTTGCATCTT 5046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565164692912640