Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7727 156 2e-32 seq10223 131 7e-25 seq8551 125 3e-23 seq9793 105 3e-17 seq6048 102 3e-16 seq7087 86.0 2e-11 >seq7727 Length=18811 Score = 156 bits (172), Expect = 2e-32 Identities = 368/547 (67%), Gaps = 18/547 (3%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||||||||| ||||| ||||||| ||| ||||| ||||| || ||| |||| || Sbjct 15922 AGCTATTGGAATTGACCTTGGTACCACCTATTCTTGTGTTGGTGTGTATCAACATGGTAA 15863 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGA-ACTACTCCTTCATGGGTAAGTTTTA 451031 || || || || || || ||||| || | || | || || || | || || | Sbjct 15862 AGTCGAGATCATTGCCAACGACCAGGG-TAACAAGACCACCCCGAGCTACGTCGCCTTCA 15804 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAA 451089 | || | ||| | ||| | || ||||||| || | ||| | ||| | | Sbjct 15803 CTGACACTGAACGCCTTATTGGAGAAGCTGCCAAGGACCAAGCCGCCAG--AAACCCTGA 15746 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149 |||||||| | ||| || ||| | | |||||||| | | |||||| ||| || || Sbjct 15745 GAACACAGTCTTTGACGCCAAAAGGCTGATTGGCCGCAAATTCGATGATCCTACCGTGCA 15686 Query 451150 AAAAGAGA--AAAAATT--CTTTTCTTA-TGATGTAGTAAATCAAAAAGGAAAGCCCTAT 451204 || || | ||| ||| | ||| | |||| || | || ||| ||| | Sbjct 15685 GAAGGACATGAAACATTGGCCCTTCAAAGTGATCGAGCGAGGAAACAAG------CCTGT 15632 Query 451205 -ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTAT 451263 ||| |||| | | ||||| |||| || || || |||||||| || || || Sbjct 15631 CATTGAAGTGGAATTCAAAGGAGAAAAGAAGCAGTTCAGACCAGAAGAAATCTCCTCCAT 15572 Query 451264 GGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGC 451323 ||| || | || ||||||||||| || || |||| |||| ||| |||||||| Sbjct 15571 GGTGCTGATCAAGATGAAAGAAACGGCCGAGGCATATCTTGGCCACAGAGTGACTGATGC 15512 Query 451324 AGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG 451383 || |||| || |||||||| |||||||||| |||||| || || || |||||||| || Sbjct 15511 TGTGGTTACGGTACCCGCTTACTTCAATGATGGACAACGACAGGCTACAAAAGATGCTGG 15452 Query 451384 ACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGC 451443 ||| ||||| | ||||| || |||| || || ||||| ||||| || || || || Sbjct 15451 TGCTATCGCTGGCCTCAATGTCCTCAGAATCATCAACGAACCCACAGCTGCGGCCCTTGC 15392 Query 451444 ATATGGA 451450 |||||| Sbjct 15391 TTATGGA 15385 >seq10223 Length=57608 Score = 131 bits (144), Expect = 7e-25 Identities = 277/410 (68%), Gaps = 5/410 (1%) Strand=Plus/Plus Query 451206 TTCAAGTAAATTATAAAGGTGAAACTAAAA-CTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||| || | || ||||| || || || | ||| | | |||||||| || ||||||||| Sbjct 45349 TTCAGGTCGAATACAAAGGAGAGACCAAGAGCTTCTTC-CCTGAAGAGATCTCATCTATG 45407 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||||| || ||||| ||||| || ||| | | || ||| ||| | ||||| Sbjct 45408 GTTCTTATCAAGATGAAGGAAACCGCCGAAGCCTTCCTCGGATCTGAAGTCAAGGATGCC 45467 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||| || || || || ||||| || | || || || || || ||||| || || Sbjct 45468 GTTGTTACCGTCCCAGCCTACTTCAACGACTCTCAGCGTCAGGCTACGAAAGACGCCGGG 45527 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||||||| |||||||||||||| || ||||| || || || ||||| | || Sbjct 45528 GCTATTGCTGGTTTGAATGTTCTTCGAATCATCAATGAGCCCACCGCCGCTGCCATCGCT 45587 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || || || | || || | | || ||| ||| | | | || ||| |||| Sbjct 45588 TACGGTCTTGACAA---GAAGGGAGGAGTTGAACGCAATGTCCTCATCTTCGATCTTGGA 45644 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| ||| || | | | || || ||||| | || || || ||| | Sbjct 45645 GGTGGTACTTTCGATGTGTCCATCTTGACCATCGACGATGGTATCTTCGAGGTTAAGTCG 45704 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 || || || ||||| | |||||||||||| | |||||| ||| || Sbjct 45705 ACAGCCGGAGACACTCACTTGGGAGGTGAAGATTTCGATAATCGAATGGT 45754 Score = 111 bits (122), Expect = 6e-19 Identities = 373/574 (65%), Gaps = 10/574 (2%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-C 452049 || |||||||| |||||||| ||||| ||||| || || || || ||||| ||| | Sbjct 46166 AACCCTGATGAGGCTGTTGCTTATGGGGCTGCTGTACAGGCTGCCATTCTCTGTGGTGAC 46225 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | || ||| || | ||| | || || | ||||| | ||||| || | || | Sbjct 46226 AAATC-TGAGAAGGTTCAGGATCTCCTTTTGCTCGATGTTGCCCCTCTGTCGTTGGGTAT 46284 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 ||| || || ||||| ||||||| || || || || ||| | ||||| || Sbjct 46285 TGAGACCGCCGGTGGTGTGATGACCTCCTTGATCAAGAGAAACACTACCATTCCCACCAA 46344 Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTT 452229 | || || || | ||| || |||||||| ||||| || || || | Sbjct 46345 GACCTCCCAGACTTTCACTACTTACTCCGACAACCAACCCGGTGTTTTGATCCAGGTCTA 46404 Query 452230 TGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAA 452289 ||||||||||| || ||||| || || || | || |||| || || Sbjct 46405 CGAAGGAGAACGGGCCATGACCAAGGACAACAACTTGTTGGGTAAATTCGAACTCTCCGG 46464 Query 452290 CATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAA 452349 |||||||| || | ||| ||||||||||| | |||| ||| ||||||| || Sbjct 46465 TATTCCTCCAGCTCCCCGTGGAGTGCCTCAAATTGAGGTCACCTTTGACATTGATGCCAA 46524 Query 452350 TGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAAT 452409 ||||| | ||||| ||| || || || |||| || | | || || || || Sbjct 46525 CGGTATCTTGAATGTATCTGCTCAGGACAAGTCGACTGGCAAGGAAAACAAGATCACCAT 46584 Query 452410 TACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGA 452469 || || || || ||| | || || ||||| ||||| | ||||| | ||||| || Sbjct 46585 CACCAACGACAAGGGACGTCTTTCCAAGGAAGAAATTGAGAGGATGGTCCAAGAAGCCGA 46644 Query 452470 AAAATTCAAGGATGATGATGAA---CAAGTTAGAAAACATGTTGAAGCTAAAAACAAACT 452526 |||| ||||| ||| |||||| ||| ||| | | ||||| ||||| ||||| || Sbjct 46645 GAAATACAAGGCTGAGGATGAAGGCCAA---AGAGATCGTGTTGCCGCTAAGAACAACCT 46701 Query 452527 AGAAGGATATTGTTATCAA-ATGAAACAAACTGT 452559 || ||| |||| |||| ||||| |||||||| Sbjct 46702 CGAGTCATACTGTT-TCAACATGAAGCAAACTGT 46734 >seq8551 Length=16238 Score = 125 bits (138), Expect = 3e-23 Identities = 252/374 (67%), Gaps = 31/374 (8%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || || ||||| ||||| ||||| || ||| || | || || ||| | | || Sbjct 14865 GTCCTCACTAAGATGAAGGAAACCGCTGAAAGTTACTTGGGAACTAAAGTCAACAACGCT 14806 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || || |||||||| || || ||||| ||| | ||||| ||||| || || ||||| || Sbjct 14805 GTCATCACTGTTCCTGCCTACTTCAACGATTCTCAACGTCAAGCCACAAAGGATGCTGGT 14746 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || ||||||||||| || ||||||||| | || |||||||| || || |||||| | || Sbjct 14745 CAGATTGCTGGTTTGAACGTTCTTCGAGTCATCAATGAACCAACTGCCGCTGCTTTGGCT 14686 Query 451445 TATGGACTAGGA-AAATC--AAAAGAAA----------CAGAAGaaaaaaaTA------- 451484 ||||| || ||| ||||| | || ||| | | ||||| | || Sbjct 14685 TATGG-CTTGGATAAATCGGACAACAAAATGTATGTTTCTGCGGAAAAGAGTATAATTTT 14627 Query 451485 --TTTTAGTA--------TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534 |||||||| || ||||| || |||||||| |||| || || | | Sbjct 14626 CTTTTTAGTATCGCTGTTTTCGATTTGGGAGGAGGAACCTTTGATGTATCAGTCTTGGAA 14567 Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 || || | || || || ||||| ||| ||||||| || || ||| || ||||| ||| Sbjct 14566 ATCCAAAAGGGAGTGTTCGAAGTTAAGTCAACCAACGGAGACACTTTCCTTGGAGGAGAA 14507 Query 451595 GATATTGATAATGC 451608 ||| | || ||||| Sbjct 14506 GATTTCGACAATGC 14493 >seq9793 Length=2388 Score = 105 bits (116), Expect = 3e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || || || |||||||| |||||| | Sbjct 1635 ATGCAGATCTTCGTGAAGACCCTGACTGGAAAGACCATCACTCTTGAGGTTGAAGCCAGC 1576 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| || ||||| ||||||||||| || || || ||| Sbjct 1575 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATCCCACCAGACCAA 1516 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || |||||||| |||||||| | ||| | | || || || Sbjct 1515 CAGAGATTGATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTTCCGACTACAAC 1456 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | ||||| || || || || || |||||||| ||| || Sbjct 1455 ATCCAGAAGGAATCTACACTCCATTTGGTGTTGAGGTTGAGAGGAGGAATGCA 1403 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || ||||| || || || || | || || || | ||| Sbjct 1179 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGGCTTCT 1120 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || || || || || |||||||||||||| || || || Sbjct 1119 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 1060 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || ||||||||||||||||| | ||| | | || || || Sbjct 1059 CAACGTCTCATCTTCGCCGGAAAACAACTTGAAGATGGCCGCACTCTCTCTGACTACAAC 1000 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 999 ATCCAGAAGGA 989 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||| || || || || |||||||| || || | || Sbjct 2153 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACTCTTGAGGTCGAGGCGTCC 2094 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | | || || || || || |||||||| || || || || || Sbjct 2093 GACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAG 2034 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || |||||| | |||||||||||||| | | |||||||| Sbjct 2033 CAACGTCTCATCTTTGCCGGAAAACAATTGGAAGATGGAAGAACCCTTTCTGATTATAAC 1974 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 1973 ATCCAGAAGGAATCCACTCTCCATTTGGT 1945 >seq6048 Length=7890 Score = 102 bits (112), Expect = 3e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || || |||||||||||||| | || || || || Sbjct 1769 AATGCAAATTTTCGTGAAAACCCTCACGGGTAAAACTATTACCTTGGAGGTAGAGCCAAG 1828 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| |||||| | | || | || || ||||| ||||||||||||||||| ||||| Sbjct 1829 CGATACCATTGACAATGTCAAGAACAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCA 1888 Query 391169 ACAACGTTTAATTTTCTCAGG 391189 |||||| | || ||| |||| Sbjct 1889 GCAACGTCTGATCTTCGCAGG 1909 >seq7087 Length=21829 Score = 86.0 bits (94), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 || || || ||||| | || | |||||| | ||||||||| |||| || || ||| Sbjct 12081 TTCGCCCCAGAAGAGGTGTCCGCCATGGTTTTGGGTAAAATGAAGGAAATCGCTGAGCAA 12022 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || |||| |||| | || || | || || || || || ||||| || || Sbjct 12021 TACCTTGGGAAGGAGGTTAAGAACGCCGTTGTCACCGTCCCAGCCTACTTCAACGACGCC 11962 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||| || || || || ||||| || |||||||||||| |||||| | || || || Sbjct 11961 CAACGTCAGGCCACCAAGGATGCCGGTGTTATTGCTGGTTTGAATGTTGTCCGTATCATC 11902 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 || || ||||| || || ||| | || ||||| Sbjct 11901 AACGAGCCTACTGCCGCCGCTATTGCCTATGG 11870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975454325478656