Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6418 86.0 5e-12 >seq6418 Length=18488 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 30183 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTG-T 30241 ||| ||||| || | ||||||| ||||| || |||| || | |||||| | ||| | Sbjct 10974 CTGAAACCCATAAATTGGTCCCAAATCTCCTTCCTCCCGATGTTTGAAGCCA-TATTGAT 11032 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA-GAGCTCT 30300 ||||||| |||| ||| || || || |||||||||||||| || || | || || || Sbjct 11033 CCAAAAACTCTCGGGATCCATTAGCATCCCAGATCTTTACTCCTTTGGCCGATAAGGTC- 11091 Query 30301 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360 ||||| || || ||||||| ||||||| || || || || | || ||||| Sbjct 11092 TTGGAATTGGTTTCACCTCTGATAAACCACAAAAGTTCTTCAACAATTGCTTTCCATGCC 11151 Query 30361 ACCCTCTTGGTCGTGAGGAGGGG 30383 || || ||||| || || || || Sbjct 11152 ACTCTTTTGGTTGTCAGAAGAGG 11174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408565648358336